Protein–RNA interactions for Protein: P55735

SEC13, Protein SEC13 homolog, humanhuman

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P55735 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 AL117328.2-201ENST00000624617 1940 ntBASIC20.47■□□□□ 0.87
SEC13P55735 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.47■□□□□ 0.87
SEC13P55735 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.47■□□□□ 0.87
SEC13P55735 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.47■□□□□ 0.87
SEC13P55735 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.47■□□□□ 0.87
SEC13P55735 EP400NL-214ENST00000641289 2402 ntBASIC20.47■□□□□ 0.87
SEC13P55735 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC13P55735 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.46■□□□□ 0.87
SEC13P55735 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SEC13P55735 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SEC13P55735 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.46■□□□□ 0.87
SEC13P55735 AC087499.1-201ENST00000418141 1075 ntBASIC20.46■□□□□ 0.87
SEC13P55735 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.46■□□□□ 0.87
SEC13P55735 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.46■□□□□ 0.87
SEC13P55735 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.46■□□□□ 0.87
SEC13P55735 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.46■□□□□ 0.87
SEC13P55735 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEC13P55735 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SEC13P55735 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SEC13P55735 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.46■□□□□ 0.87
SEC13P55735 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.45■□□□□ 0.87
SEC13P55735 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.45■□□□□ 0.87
SEC13P55735 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.45■□□□□ 0.86
SEC13P55735 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 AC023632.3-201ENST00000521633 145 ntBASIC20.45■□□□□ 0.86
SEC13P55735 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.45■□□□□ 0.86
SEC13P55735 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.45■□□□□ 0.86
SEC13P55735 AL121829.2-201ENST00000620908 328 ntBASIC20.45■□□□□ 0.86
SEC13P55735 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SEC13P55735 HTR7P1-201ENST00000538670 1336 ntBASIC20.45■□□□□ 0.86
SEC13P55735 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SEC13P55735 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SEC13P55735 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC13P55735 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 AC121338.2-201ENST00000622535 1744 ntBASIC20.44■□□□□ 0.86
SEC13P55735 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 NBPF21P-201ENST00000425093 1451 ntBASIC20.44■□□□□ 0.86
SEC13P55735 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.44■□□□□ 0.86
SEC13P55735 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.44■□□□□ 0.86
SEC13P55735 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.44■□□□□ 0.86
SEC13P55735 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.44■□□□□ 0.86
SEC13P55735 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.44■□□□□ 0.86
SEC13P55735 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SEC13P55735 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.44■□□□□ 0.86
SEC13P55735 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.44■□□□□ 0.86
SEC13P55735 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SEC13P55735 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC13P55735 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SEC13P55735 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.44■□□□□ 0.86
SEC13P55735 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SEC13P55735 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEC13P55735 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms