Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH4P55283 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH4P55283 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH4P55283 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH4P55283 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH4P55283 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.65■□□□□ 0.9
CDH4P55283 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH4P55283 AC008403.3-201ENST00000598924 454 ntBASIC20.65■□□□□ 0.9
CDH4P55283 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH4P55283 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH4P55283 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH4P55283 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH4P55283 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH4P55283 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CDH4P55283 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH4P55283 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH4P55283 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH4P55283 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDH4P55283 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH4P55283 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH4P55283 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH4P55283 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDH4P55283 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH4P55283 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH4P55283 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.63■□□□□ 0.89
CDH4P55283 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDH4P55283 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH4P55283 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 HLA-G-202ENST00000376815 851 ntBASIC20.63■□□□□ 0.89
CDH4P55283 HLA-G-203ENST00000376818 1127 ntBASIC20.63■□□□□ 0.89
CDH4P55283 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.63■□□□□ 0.89
CDH4P55283 AC006557.6-201ENST00000623071 864 ntBASIC20.63■□□□□ 0.89
CDH4P55283 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH4P55283 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH4P55283 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDH4P55283 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH4P55283 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDH4P55283 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDH4P55283 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH4P55283 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH4P55283 KRT8P20-201ENST00000423953 1409 ntBASIC20.62■□□□□ 0.89
CDH4P55283 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH4P55283 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CDH4P55283 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH4P55283 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH4P55283 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH4P55283 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH4P55283 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.62■□□□□ 0.89
CDH4P55283 AL031963.3-201ENST00000606441 850 ntBASIC20.62■□□□□ 0.89
CDH4P55283 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH4P55283 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH4P55283 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH4P55283 AC020907.5-201ENST00000624372 1936 ntBASIC20.62■□□□□ 0.89
CDH4P55283 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH4P55283 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDH4P55283 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH4P55283 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDH4P55283 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH4P55283 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH4P55283 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH4P55283 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDH4P55283 AC008687.6-201ENST00000596318 630 ntBASIC20.61■□□□□ 0.89
CDH4P55283 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.61■□□□□ 0.89
CDH4P55283 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 KRT8P17-201ENST00000453110 1448 ntBASIC20.61■□□□□ 0.89
CDH4P55283 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH4P55283 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDH4P55283 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH4P55283 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDH4P55283 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.6■□□□□ 0.89
CDH4P55283 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH4P55283 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDH4P55283 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH4P55283 ITM2C-210ENST00000620962 501 ntBASIC20.6■□□□□ 0.89
CDH4P55283 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH4P55283 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms