Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB3P54753 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
EPHB3P54753 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB3P54753 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
EPHB3P54753 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB3P54753 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
EPHB3P54753 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.14■□□□□ 0.97
EPHB3P54753 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.14■□□□□ 0.97
EPHB3P54753 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.14■□□□□ 0.97
EPHB3P54753 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB3P54753 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.14■□□□□ 0.97
EPHB3P54753 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.14■□□□□ 0.97
EPHB3P54753 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.14■□□□□ 0.97
EPHB3P54753 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB3P54753 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.14■□□□□ 0.97
EPHB3P54753 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
EPHB3P54753 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.13■□□□□ 0.97
EPHB3P54753 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
EPHB3P54753 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
EPHB3P54753 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.13■□□□□ 0.97
EPHB3P54753 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 HLA-G-202ENST00000376815 851 ntBASIC21.13■□□□□ 0.97
EPHB3P54753 HLA-G-203ENST00000376818 1127 ntBASIC21.13■□□□□ 0.97
EPHB3P54753 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.13■□□□□ 0.97
EPHB3P54753 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
EPHB3P54753 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB3P54753 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.13■□□□□ 0.97
EPHB3P54753 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.12■□□□□ 0.97
EPHB3P54753 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.12■□□□□ 0.97
EPHB3P54753 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.12■□□□□ 0.97
EPHB3P54753 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.12■□□□□ 0.97
EPHB3P54753 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
EPHB3P54753 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.12■□□□□ 0.97
EPHB3P54753 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
EPHB3P54753 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHB3P54753 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHB3P54753 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EPHB3P54753 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.11■□□□□ 0.97
EPHB3P54753 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.11■□□□□ 0.97
EPHB3P54753 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EPHB3P54753 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.11■□□□□ 0.97
EPHB3P54753 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.11■□□□□ 0.97
EPHB3P54753 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.11■□□□□ 0.97
EPHB3P54753 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHB3P54753 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHB3P54753 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHB3P54753 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EPHB3P54753 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.11■□□□□ 0.97
EPHB3P54753 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHB3P54753 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.1■□□□□ 0.97
EPHB3P54753 PLK5-205ENST00000642079 1969 ntBASIC21.1■□□□□ 0.97
EPHB3P54753 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
EPHB3P54753 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 RARRES2P10-201ENST00000564312 460 ntBASIC21.1■□□□□ 0.97
EPHB3P54753 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHB3P54753 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.1■□□□□ 0.97
EPHB3P54753 AL049637.2-201ENST00000641778 930 ntBASIC21.1■□□□□ 0.97
EPHB3P54753 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.1■□□□□ 0.97
EPHB3P54753 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
EPHB3P54753 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
EPHB3P54753 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
EPHB3P54753 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHB3P54753 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHB3P54753 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.09■□□□□ 0.97
EPHB3P54753 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHB3P54753 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.09■□□□□ 0.97
EPHB3P54753 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms