Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.99■□□□□ 0.79
CLNS1AP54105 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CLNS1AP54105 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.99■□□□□ 0.79
CLNS1AP54105 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.99■□□□□ 0.79
CLNS1AP54105 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.99■□□□□ 0.79
CLNS1AP54105 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.99■□□□□ 0.79
CLNS1AP54105 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.99■□□□□ 0.79
CLNS1AP54105 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLNS1AP54105 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CLNS1AP54105 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLNS1AP54105 AC135279.3-201ENST00000610945 1311 ntBASIC19.99■□□□□ 0.79
CLNS1AP54105 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CLNS1AP54105 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CLNS1AP54105 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLNS1AP54105 AC020916.1-201ENST00000587762 1774 ntBASIC19.98■□□□□ 0.79
CLNS1AP54105 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLNS1AP54105 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.98■□□□□ 0.79
CLNS1AP54105 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLNS1AP54105 AC006128.1-201ENST00000624704 1661 ntBASIC19.98■□□□□ 0.79
CLNS1AP54105 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.98■□□□□ 0.79
CLNS1AP54105 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.98■□□□□ 0.79
CLNS1AP54105 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLNS1AP54105 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.98■□□□□ 0.79
CLNS1AP54105 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLNS1AP54105 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
CLNS1AP54105 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 AC055733.4-201ENST00000638462 1354 ntBASIC19.97■□□□□ 0.79
CLNS1AP54105 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.97■□□□□ 0.79
CLNS1AP54105 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLNS1AP54105 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.97■□□□□ 0.79
CLNS1AP54105 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.97■□□□□ 0.79
CLNS1AP54105 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.97■□□□□ 0.79
CLNS1AP54105 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.97■□□□□ 0.79
CLNS1AP54105 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLNS1AP54105 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.97■□□□□ 0.79
CLNS1AP54105 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CLNS1AP54105 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.97■□□□□ 0.79
CLNS1AP54105 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.97■□□□□ 0.79
CLNS1AP54105 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.97■□□□□ 0.79
CLNS1AP54105 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLNS1AP54105 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.96■□□□□ 0.79
CLNS1AP54105 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.96■□□□□ 0.79
CLNS1AP54105 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLNS1AP54105 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.96■□□□□ 0.79
CLNS1AP54105 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.96■□□□□ 0.79
CLNS1AP54105 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.96■□□□□ 0.79
CLNS1AP54105 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLNS1AP54105 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLNS1AP54105 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CLNS1AP54105 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLNS1AP54105 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.95■□□□□ 0.78
CLNS1AP54105 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLNS1AP54105 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.95■□□□□ 0.78
CLNS1AP54105 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLNS1AP54105 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.95■□□□□ 0.78
CLNS1AP54105 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms