Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 YMR175W-AYMR175W-A 195 nt0.74□□□□□ -2.29
LSM7P53905 YPR117WYPR117W 7470 nt0.73□□□□□ -2.29
LSM7P53905 LYS14YDR034C 2373 nt0.73□□□□□ -2.29
LSM7P53905 YMR153C-AYMR153C-A 336 nt0.73□□□□□ -2.29
LSM7P53905 RUF22RUF22 515 nt0.73□□□□□ -2.29
LSM7P53905 YBR200W-AYBR200W-A 165 nt0.73□□□□□ -2.29
LSM7P53905 SET3YKR029C 2256 nt0.73□□□□□ -2.29
LSM7P53905 Q0255Q0255 1419 nt0.72□□□□□ -2.29
LSM7P53905 IFH1YLR223C 3258 nt0.72□□□□□ -2.29
LSM7P53905 SCW11YGL028C 1629 nt0.72□□□□□ -2.29
LSM7P53905 VMA21YGR105W 234 nt0.72□□□□□ -2.29
LSM7P53905 YIL029CYIL029C 429 nt0.72□□□□□ -2.29
LSM7P53905 HIT1YJR055W 495 nt0.72□□□□□ -2.29
LSM7P53905 YML003WYML003W 873 nt0.72□□□□□ -2.29
LSM7P53905 SHE9YDR393W 1371 nt0.71□□□□□ -2.3
LSM7P53905 GUP1YGL084C 1683 nt0.71□□□□□ -2.3
LSM7P53905 RIM20YOR275C 1986 nt0.7□□□□□ -2.3
LSM7P53905 YFR009W-AYFR009W-A 258 nt0.7□□□□□ -2.3
LSM7P53905 YKL023C-AYKL023C-A 228 nt0.7□□□□□ -2.3
LSM7P53905 SDH2YLL041C 801 nt0.7□□□□□ -2.3
LSM7P53905 FIG4YNL325C 2640 nt0.7□□□□□ -2.3
LSM7P53905 STO1YMR125W 2586 nt0.7□□□□□ -2.3
LSM7P53905 TTI1YKL033W 3117 nt0.69□□□□□ -2.3
LSM7P53905 NUP157YER105C 4176 nt0.69□□□□□ -2.3
LSM7P53905 YLR146W-AYLR146W-A 189 nt0.69□□□□□ -2.3
LSM7P53905 YPR039WYPR039W 336 nt0.69□□□□□ -2.3
LSM7P53905 YDL206WYDL206W 2289 nt0.69□□□□□ -2.3
LSM7P53905 SEC1YDR164C 2175 nt0.69□□□□□ -2.3
LSM7P53905 SWI6YLR182W 2412 nt0.68□□□□□ -2.3
LSM7P53905 YDR250CYDR250C 276 nt0.68□□□□□ -2.3
LSM7P53905 YBL029C-AYBL029C-A 285 nt0.68□□□□□ -2.3
LSM7P53905 IRC16YPR038W 360 nt0.68□□□□□ -2.3
LSM7P53905 PDE2YOR360C 1581 nt0.67□□□□□ -2.3
LSM7P53905 YDR182W-AYDR182W-A 204 nt0.67□□□□□ -2.3
LSM7P53905 YAP3YHL009C 993 nt0.67□□□□□ -2.3
LSM7P53905 TMA22YJR014W 597 nt0.67□□□□□ -2.3
LSM7P53905 ILM1YJR118C 612 nt0.67□□□□□ -2.3
LSM7P53905 YOR199WYOR199W 330 nt0.67□□□□□ -2.3
LSM7P53905 PXA2YKL188C 2562 nt0.67□□□□□ -2.3
LSM7P53905 NHP2YDL208W 471 nt0.66□□□□□ -2.3
LSM7P53905 YKL044WYKL044W 321 nt0.66□□□□□ -2.3
LSM7P53905 UPS1YLR193C 528 nt0.66□□□□□ -2.3
LSM7P53905 ENV11YGR071C 2583 nt0.66□□□□□ -2.3
LSM7P53905 SLY1YDR189W 2001 nt0.65□□□□□ -2.3
LSM7P53905 SLD3YGL113W 2007 nt0.65□□□□□ -2.3
LSM7P53905 YLL032CYLL032C 2478 nt0.65□□□□□ -2.3
LSM7P53905 APL2YKL135C 2181 nt0.65□□□□□ -2.31
LSM7P53905 MXR1YER042W 555 nt0.65□□□□□ -2.31
LSM7P53905 MMS4YBR098W 2076 nt0.65□□□□□ -2.31
LSM7P53905 LCD1YDR499W 2244 nt0.64□□□□□ -2.31
LSM7P53905 ALY2YJL084C 3141 nt0.64□□□□□ -2.31
LSM7P53905 YKL068W-AYKL068W-A 237 nt0.64□□□□□ -2.31
LSM7P53905 YML009C-AYML009C-A 327 nt0.64□□□□□ -2.31
LSM7P53905 YDL196WYDL196W 330 nt0.63□□□□□ -2.31
LSM7P53905 YDR521WYDR521W 336 nt0.63□□□□□ -2.31
LSM7P53905 YIL059CYIL059C 366 nt0.63□□□□□ -2.31
LSM7P53905 RFX1YLR176C 2436 nt0.63□□□□□ -2.31
LSM7P53905 NBL1YHR199C-A 222 nt0.62□□□□□ -2.31
LSM7P53905 MRPL31YKL138C 396 nt0.62□□□□□ -2.31
LSM7P53905 BER1YLR412W 825 nt0.62□□□□□ -2.31
LSM7P53905 RRT1YBL048W 312 nt0.62□□□□□ -2.31
LSM7P53905 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
LSM7P53905 RPL32YBL092W 393 nt0.62□□□□□ -2.31
LSM7P53905 OCA6YDR067C 675 nt0.61□□□□□ -2.31
LSM7P53905 APQ13YJL075C 417 nt0.61□□□□□ -2.31
LSM7P53905 CMC4YMR194C-B 222 nt0.61□□□□□ -2.31
LSM7P53905 SVS1YPL163C 783 nt0.61□□□□□ -2.31
LSM7P53905 SWF1YDR126W 1011 nt0.6□□□□□ -2.31
LSM7P53905 YER076W-AYER076W-A 348 nt0.6□□□□□ -2.31
LSM7P53905 YJR141WYJR141W 1044 nt0.6□□□□□ -2.31
LSM7P53905 RKR1YMR247C 4689 nt0.6□□□□□ -2.31
LSM7P53905 RCN2YOR220W 798 nt0.6□□□□□ -2.31
LSM7P53905 YDL073WYDL073W 2955 nt0.6□□□□□ -2.31
LSM7P53905 YER023C-AYER023C-A 213 nt0.59□□□□□ -2.31
LSM7P53905 HUR1YGL168W 333 nt0.59□□□□□ -2.31
LSM7P53905 YPR159C-AYPR159C-A 102 nt0.59□□□□□ -2.31
LSM7P53905 SLI15YBR156C 2097 nt0.59□□□□□ -2.32
LSM7P53905 WAR1YML076C 2835 nt0.59□□□□□ -2.32
LSM7P53905 NPC2YDL046W 522 nt0.58□□□□□ -2.32
LSM7P53905 MET32YDR253C 576 nt0.58□□□□□ -2.32
LSM7P53905 YER135CYER135C 393 nt0.58□□□□□ -2.32
LSM7P53905 YGL239CYGL239C 315 nt0.58□□□□□ -2.32
LSM7P53905 IES4YOR189W 351 nt0.58□□□□□ -2.32
LSM7P53905 YPR153WYPR153W 423 nt0.58□□□□□ -2.32
LSM7P53905 YDR269CYDR269C 324 nt0.57□□□□□ -2.32
LSM7P53905 ALG13YGL047W 609 nt0.57□□□□□ -2.32
LSM7P53905 YGR025WYGR025W 303 nt0.57□□□□□ -2.32
LSM7P53905 YHR139C-AYHR139C-A 312 nt0.57□□□□□ -2.32
LSM7P53905 snR13snR13 124 nt0.57□□□□□ -2.32
LSM7P53905 PHS1YJL097W 654 nt0.56□□□□□ -2.32
LSM7P53905 YMR031W-AYMR031W-A 327 nt0.56□□□□□ -2.32
LSM7P53905 DBP6YNR038W 1890 nt0.56□□□□□ -2.32
LSM7P53905 YDL016CYDL016C 303 nt0.55□□□□□ -2.32
LSM7P53905 YGR042WYGR042W 816 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)BtT(AGU)B 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)CtT(AGU)C 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)DtT(AGU)D 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)HtT(AGU)H 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)I1tT(AGU)I1 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)I2tT(AGU)I2 73 nt0.55□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 41.3 ms