Protein–RNA interactions for Protein: P47001

CIS3, Cell wall mannoprotein CIS3, yeastyeast

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIS3P47001 EMC5YIL027C 426 nt0.98□□□□□ -2.25
CIS3P47001 RPL40BYKR094C 387 nt0.98□□□□□ -2.25
CIS3P47001 YML108WYML108W 318 nt0.98□□□□□ -2.25
CIS3P47001 ROM2YLR371W 4071 nt0.98□□□□□ -2.25
CIS3P47001 SMC4YLR086W 4257 nt0.98□□□□□ -2.25
CIS3P47001 EST2YLR318W 2655 nt0.98□□□□□ -2.25
CIS3P47001 YDR003W-AYDR003W-A 123 nt0.97□□□□□ -2.25
CIS3P47001 CLU1YMR012W 3834 nt0.97□□□□□ -2.25
CIS3P47001 MVP1YMR004W 1536 nt0.97□□□□□ -2.25
CIS3P47001 tF(GAA)BtF(GAA)B 73 nt0.96□□□□□ -2.26
CIS3P47001 tF(GAA)FtF(GAA)F 73 nt0.96□□□□□ -2.26
CIS3P47001 tF(GAA)GtF(GAA)G 73 nt0.96□□□□□ -2.26
CIS3P47001 tF(GAA)H1tF(GAA)H1 73 nt0.96□□□□□ -2.26
CIS3P47001 tF(GAA)H2tF(GAA)H2 73 nt0.96□□□□□ -2.26
CIS3P47001 tF(GAA)MtF(GAA)M 73 nt0.96□□□□□ -2.26
CIS3P47001 tF(GAA)P1tF(GAA)P1 73 nt0.96□□□□□ -2.26
CIS3P47001 tF(GAA)P2tF(GAA)P2 73 nt0.96□□□□□ -2.26
CIS3P47001 MTC7YEL033W 420 nt0.96□□□□□ -2.26
CIS3P47001 NBL1YHR199C-A 222 nt0.96□□□□□ -2.26
CIS3P47001 TOM22YNL131W 459 nt0.96□□□□□ -2.26
CIS3P47001 YOL013W-BYOL013W-B 291 nt0.96□□□□□ -2.26
CIS3P47001 YOP1YPR028W 543 nt0.96□□□□□ -2.26
CIS3P47001 YSY6YBR162W-A 198 nt0.96□□□□□ -2.26
CIS3P47001 TOF2YKR010C 2316 nt0.96□□□□□ -2.26
CIS3P47001 UFD2YDL190C 2886 nt0.95□□□□□ -2.26
CIS3P47001 RAD9YDR217C 3930 nt0.95□□□□□ -2.26
CIS3P47001 BI2Q0110 1272 nt0.95□□□□□ -2.26
CIS3P47001 YML009C-AYML009C-A 327 nt0.95□□□□□ -2.26
CIS3P47001 ATP19YOL077W-A 207 nt0.95□□□□□ -2.26
CIS3P47001 GAL7YBR018C 1101 nt0.95□□□□□ -2.26
CIS3P47001 YBR076C-AYBR076C-A 267 nt0.95□□□□□ -2.26
CIS3P47001 SWI5YDR146C 2130 nt0.95□□□□□ -2.26
CIS3P47001 YJR003CYJR003C 1560 nt0.95□□□□□ -2.26
CIS3P47001 SPT7YBR081C 3999 nt0.94□□□□□ -2.26
CIS3P47001 SRP14YDL092W 441 nt0.94□□□□□ -2.26
CIS3P47001 YHR125WYHR125W 306 nt0.94□□□□□ -2.26
CIS3P47001 YHR130CYHR130C 336 nt0.94□□□□□ -2.26
CIS3P47001 URM1YIL008W 300 nt0.94□□□□□ -2.26
CIS3P47001 HIT1YJR055W 495 nt0.94□□□□□ -2.26
CIS3P47001 NFU1YKL040C 771 nt0.94□□□□□ -2.26
CIS3P47001 YMR175W-AYMR175W-A 195 nt0.94□□□□□ -2.26
CIS3P47001 YMR242W-AYMR242W-A 90 nt0.94□□□□□ -2.26
CIS3P47001 RPL32YBL092W 393 nt0.94□□□□□ -2.26
CIS3P47001 YOR192C-CYOR192C-C 237 nt0.94□□□□□ -2.26
CIS3P47001 snR41snR41 95 nt0.94□□□□□ -2.26
CIS3P47001 YOR192C-AYOR192C-A 1317 nt0.93□□□□□ -2.26
CIS3P47001 MSN5YDR335W 3675 nt0.93□□□□□ -2.26
CIS3P47001 EAF1YDR359C 2949 nt0.93□□□□□ -2.26
CIS3P47001 SPO23YBR250W 1572 nt0.93□□□□□ -2.26
CIS3P47001 YLR171WYLR171W 390 nt0.93□□□□□ -2.26
CIS3P47001 YOR376WYOR376W 369 nt0.93□□□□□ -2.26
CIS3P47001 MLH3YPL164C 2148 nt0.92□□□□□ -2.26
CIS3P47001 NUP188YML103C 4968 nt0.92□□□□□ -2.26
CIS3P47001 YCS4YLR272C 3531 nt0.92□□□□□ -2.26
CIS3P47001 YGL217CYGL217C 342 nt0.92□□□□□ -2.26
CIS3P47001 YGL239CYGL239C 315 nt0.92□□□□□ -2.26
CIS3P47001 YHL009W-AYHL009W-A 1242 nt0.92□□□□□ -2.26
CIS3P47001 TIM18YOR297C 579 nt0.92□□□□□ -2.26
CIS3P47001 RSM22YKL155C 1887 nt0.92□□□□□ -2.26
CIS3P47001 PXA2YKL188C 2562 nt0.91□□□□□ -2.26
CIS3P47001 RRT15YLR162W-A 189 nt0.91□□□□□ -2.26
CIS3P47001 RAD50YNL250W 3939 nt0.91□□□□□ -2.26
CIS3P47001 LYS14YDR034C 2373 nt0.91□□□□□ -2.26
CIS3P47001 YCK3YER123W 1575 nt0.91□□□□□ -2.26
CIS3P47001 NUT1YGL151W 3399 nt0.91□□□□□ -2.26
CIS3P47001 MKT1YNL085W 2493 nt0.91□□□□□ -2.26
CIS3P47001 SLX4YLR135W 2247 nt0.91□□□□□ -2.26
CIS3P47001 AZF1YOR113W 2745 nt0.9□□□□□ -2.26
CIS3P47001 YMR153C-AYMR153C-A 336 nt0.9□□□□□ -2.27
CIS3P47001 RUF22RUF22 515 nt0.9□□□□□ -2.27
CIS3P47001 ZIP1YDR285W 2628 nt0.9□□□□□ -2.27
CIS3P47001 CDC39YCR093W 6327 nt0.89□□□□□ -2.27
CIS3P47001 GDS1YOR355W 1569 nt0.89□□□□□ -2.27
CIS3P47001 YDL211CYDL211C 1119 nt0.89□□□□□ -2.27
CIS3P47001 ECL1YGR146C 636 nt0.89□□□□□ -2.27
CIS3P47001 YLR456WYLR456W 615 nt0.89□□□□□ -2.27
CIS3P47001 ISF1YMR081C 1017 nt0.89□□□□□ -2.27
CIS3P47001 ZEO1YOL109W 342 nt0.89□□□□□ -2.27
CIS3P47001 YOR072W-AYOR072W-A 249 nt0.89□□□□□ -2.27
CIS3P47001 snR14snR14 160 nt0.89□□□□□ -2.27
CIS3P47001 snR54snR54 86 nt0.89□□□□□ -2.27
CIS3P47001 PIG1YLR273C 1947 nt0.89□□□□□ -2.27
CIS3P47001 ENV11YGR071C 2583 nt0.89□□□□□ -2.27
CIS3P47001 SGO1YOR073W 1773 nt0.88□□□□□ -2.27
CIS3P47001 NST1YNL091W 3723 nt0.88□□□□□ -2.27
CIS3P47001 SEC5YDR166C 2916 nt0.88□□□□□ -2.27
CIS3P47001 YER087C-AYER087C-A 552 nt0.88□□□□□ -2.27
CIS3P47001 YLR101CYLR101C 396 nt0.88□□□□□ -2.27
CIS3P47001 YLR146W-AYLR146W-A 189 nt0.88□□□□□ -2.27
CIS3P47001 NUP145YGL092W 3954 nt0.88□□□□□ -2.27
CIS3P47001 BEM2YER155C 6504 nt0.88□□□□□ -2.27
CIS3P47001 APL1YJR005W 2103 nt0.88□□□□□ -2.27
CIS3P47001 YDR114CYDR114C 303 nt0.87□□□□□ -2.27
CIS3P47001 WIP1YDR374W-A 270 nt0.87□□□□□ -2.27
CIS3P47001 RTR1YER139C 681 nt0.87□□□□□ -2.27
CIS3P47001 YLR202CYLR202C 327 nt0.87□□□□□ -2.27
CIS3P47001 YOR161W-BYOR161W-B 261 nt0.87□□□□□ -2.27
CIS3P47001 YPR063CYPR063C 423 nt0.87□□□□□ -2.27
CIS3P47001 Q0017Q0017 162 nt0.87□□□□□ -2.27
CIS3P47001 YJR029WYJR029W 5268 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 8.4 ms