Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MMP13P45452 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP13P45452 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP13P45452 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP13P45452 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP13P45452 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.95■□□□□ 0.94
MMP13P45452 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP13P45452 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP13P45452 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.95■□□□□ 0.94
MMP13P45452 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP13P45452 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP13P45452 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP13P45452 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP13P45452 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
MMP13P45452 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP13P45452 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MMP13P45452 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP13P45452 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.94■□□□□ 0.94
MMP13P45452 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP13P45452 AC016405.3-201ENST00000607710 860 ntBASIC20.94■□□□□ 0.94
MMP13P45452 FAM21FP-204ENST00000608637 956 ntBASIC20.94■□□□□ 0.94
MMP13P45452 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP13P45452 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP13P45452 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP13P45452 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
MMP13P45452 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP13P45452 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP13P45452 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.93■□□□□ 0.94
MMP13P45452 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.93■□□□□ 0.94
MMP13P45452 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP13P45452 BX323043.1-201ENST00000641006 1765 ntBASIC20.93■□□□□ 0.94
MMP13P45452 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MMP13P45452 CYP2T1P-201ENST00000432607 1285 ntBASIC20.93■□□□□ 0.94
MMP13P45452 AC026185.1-201ENST00000445748 174 ntBASIC20.93■□□□□ 0.94
MMP13P45452 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
MMP13P45452 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.93■□□□□ 0.94
MMP13P45452 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.93■□□□□ 0.94
MMP13P45452 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MMP13P45452 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.93■□□□□ 0.94
MMP13P45452 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 AC018445.3-201ENST00000624177 1945 ntBASIC20.93■□□□□ 0.94
MMP13P45452 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
MMP13P45452 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP13P45452 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MMP13P45452 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP13P45452 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MMP13P45452 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MMP13P45452 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP13P45452 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.92■□□□□ 0.94
MMP13P45452 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP13P45452 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP13P45452 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.92■□□□□ 0.94
MMP13P45452 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 AC005181.1-201ENST00000604782 1256 ntBASIC20.92■□□□□ 0.94
MMP13P45452 RAP2CP1-201ENST00000605103 478 ntBASIC20.92■□□□□ 0.94
MMP13P45452 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MMP13P45452 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
MMP13P45452 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
MMP13P45452 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP13P45452 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP13P45452 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP13P45452 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MMP13P45452 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP13P45452 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
MMP13P45452 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP13P45452 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP13P45452 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
MMP13P45452 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP13P45452 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MMP13P45452 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP13P45452 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP13P45452 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP13P45452 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
MMP13P45452 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
MMP13P45452 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP13P45452 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP13P45452 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms