Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
CTSKP43235 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CTSKP43235 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CTSKP43235 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CTSKP43235 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 AC211429.1-201ENST00000415277 523 ntBASIC20.08■□□□□ 0.81
CTSKP43235 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CTSKP43235 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSKP43235 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.08■□□□□ 0.81
CTSKP43235 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.08■□□□□ 0.81
CTSKP43235 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.08■□□□□ 0.81
CTSKP43235 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSKP43235 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSKP43235 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.08■□□□□ 0.8
CTSKP43235 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSKP43235 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.08■□□□□ 0.8
CTSKP43235 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSKP43235 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSKP43235 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTSKP43235 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CTSKP43235 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CTSKP43235 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CTSKP43235 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.07■□□□□ 0.8
CTSKP43235 AC239809.2-201ENST00000415381 517 ntBASIC20.07■□□□□ 0.8
CTSKP43235 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.07■□□□□ 0.8
CTSKP43235 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.07■□□□□ 0.8
CTSKP43235 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSKP43235 AL356652.1-201ENST00000615962 565 ntBASIC20.07■□□□□ 0.8
CTSKP43235 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CTSKP43235 AC006557.6-201ENST00000623071 864 ntBASIC20.07■□□□□ 0.8
CTSKP43235 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSKP43235 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.07■□□□□ 0.8
CTSKP43235 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSKP43235 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CTSKP43235 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSKP43235 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSKP43235 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.06■□□□□ 0.8
CTSKP43235 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CTSKP43235 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CTSKP43235 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSKP43235 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CTSKP43235 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.06■□□□□ 0.8
CTSKP43235 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CTSKP43235 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSKP43235 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSKP43235 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSKP43235 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTSKP43235 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSKP43235 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSKP43235 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CTSKP43235 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.05■□□□□ 0.8
CTSKP43235 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSKP43235 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.05■□□□□ 0.8
CTSKP43235 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CTSKP43235 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSKP43235 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CTSKP43235 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSKP43235 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.05■□□□□ 0.8
CTSKP43235 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSKP43235 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSKP43235 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.04■□□□□ 0.8
CTSKP43235 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSKP43235 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CTSKP43235 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSKP43235 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CTSKP43235 TSPY7P-201ENST00000431358 1114 ntBASIC20.04■□□□□ 0.8
CTSKP43235 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSKP43235 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSKP43235 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSKP43235 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms