Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 FIR1YER032W 2631 nt2.49□□□□□ -2.01
SDS3P40505 snR74snR74 88 nt2.49□□□□□ -2.01
SDS3P40505 YOR333CYOR333C 417 nt2.49□□□□□ -2.01
SDS3P40505 POM152YMR129W 4014 nt2.49□□□□□ -2.01
SDS3P40505 BAS1YKR099W 2436 nt2.49□□□□□ -2.01
SDS3P40505 PEX8YGR077C 1770 nt2.49□□□□□ -2.01
SDS3P40505 VPS54YDR027C 2670 nt2.48□□□□□ -2.01
SDS3P40505 SPT21YMR179W 2277 nt2.48□□□□□ -2.01
SDS3P40505 TOF1YNL273W 3717 nt2.48□□□□□ -2.01
SDS3P40505 RRP12YPL012W 3687 nt2.48□□□□□ -2.01
SDS3P40505 snR46snR46 197 nt2.48□□□□□ -2.01
SDS3P40505 SSQ1YLR369W 1974 nt2.47□□□□□ -2.01
SDS3P40505 SAP190YKR028W 3102 nt2.47□□□□□ -2.01
SDS3P40505 YDR286CYDR286C 345 nt2.47□□□□□ -2.01
SDS3P40505 YIR030W-AYIR030W-A 384 nt2.47□□□□□ -2.01
SDS3P40505 YKL165C-AYKL165C-A 234 nt2.47□□□□□ -2.01
SDS3P40505 YOR381W-AYOR381W-A 168 nt2.47□□□□□ -2.01
SDS3P40505 SEC16YPL085W 6588 nt2.47□□□□□ -2.01
SDS3P40505 NOP53YPL146C 1368 nt2.47□□□□□ -2.01
SDS3P40505 CUL3YGR003W 2235 nt2.46□□□□□ -2.01
SDS3P40505 YFR016CYFR016C 3702 nt2.46□□□□□ -2.02
SDS3P40505 TAE2YPL009C 3117 nt2.46□□□□□ -2.02
SDS3P40505 YDR524C-AYDR524C-A 120 nt2.46□□□□□ -2.02
SDS3P40505 RGM1YMR182C 636 nt2.46□□□□□ -2.02
SDS3P40505 SNC2YOR327C 348 nt2.46□□□□□ -2.02
SDS3P40505 VMA9YCL005W-A 222 nt2.46□□□□□ -2.02
SDS3P40505 COS111YBR203W 2775 nt2.46□□□□□ -2.02
SDS3P40505 RGA1YOR127W 3024 nt2.46□□□□□ -2.02
SDS3P40505 EFR3YMR212C 2349 nt2.46□□□□□ -2.02
SDS3P40505 SSD1YDR293C 3753 nt2.46□□□□□ -2.02
SDS3P40505 APL5YPL195W 2799 nt2.45□□□□□ -2.02
SDS3P40505 PLC1YPL268W 2610 nt2.45□□□□□ -2.02
SDS3P40505 MUK1YPL070W 1839 nt2.45□□□□□ -2.02
SDS3P40505 VPS35YJL154C 2835 nt2.45□□□□□ -2.02
SDS3P40505 BNR1YIL159W 4128 nt2.45□□□□□ -2.02
SDS3P40505 UFD4YKL010C 4452 nt2.45□□□□□ -2.02
SDS3P40505 SWR1YDR334W 4545 nt2.44□□□□□ -2.02
SDS3P40505 RPS27BYHR021C 249 nt2.44□□□□□ -2.02
SDS3P40505 NUP120YKL057C 3114 nt2.44□□□□□ -2.02
SDS3P40505 VPH1YOR270C 2523 nt2.44□□□□□ -2.02
SDS3P40505 UBP11YKR098C 2154 nt2.44□□□□□ -2.02
SDS3P40505 YLR149CYLR149C 2193 nt2.43□□□□□ -2.02
SDS3P40505 PTC5YOR090C 1719 nt2.43□□□□□ -2.02
SDS3P40505 YIL080WYIL080W 4722 nt2.43□□□□□ -2.02
SDS3P40505 snR76snR76 109 nt2.43□□□□□ -2.02
SDS3P40505 YHR180W-AYHR180W-A 183 nt2.43□□□□□ -2.02
SDS3P40505 VPS34YLR240W 2628 nt2.43□□□□□ -2.02
SDS3P40505 KSP1YHR082C 3090 nt2.42□□□□□ -2.02
SDS3P40505 TRA1YHR099W 11235 nt2.42□□□□□ -2.02
SDS3P40505 NUP170YBL079W 4509 nt2.41□□□□□ -2.02
SDS3P40505 TFC3YAL001C 3483 nt2.41□□□□□ -2.02
SDS3P40505 SGF11YPL047W 300 nt2.41□□□□□ -2.02
SDS3P40505 GRR1YJR090C 3456 nt2.41□□□□□ -2.02
SDS3P40505 EDS1YBR033W 2760 nt2.4□□□□□ -2.02
SDS3P40505 SEF1YBL066C 3447 nt2.4□□□□□ -2.03
SDS3P40505 INP2YMR163C 2118 nt2.4□□□□□ -2.03
SDS3P40505 YPR097WYPR097W 3222 nt2.4□□□□□ -2.03
SDS3P40505 AFI1YOR129C 2682 nt2.4□□□□□ -2.03
SDS3P40505 GCV2YMR189W 3105 nt2.39□□□□□ -2.03
SDS3P40505 YPR089WYPR089W 2667 nt2.39□□□□□ -2.03
SDS3P40505 TIM9YEL020W-A 264 nt2.39□□□□□ -2.03
SDS3P40505 ULI1YFR026C 510 nt2.39□□□□□ -2.03
SDS3P40505 YBL053WYBL053W 375 nt2.39□□□□□ -2.03
SDS3P40505 CLN3YAL040C 1743 nt2.39□□□□□ -2.03
SDS3P40505 PXA2YKL188C 2562 nt2.38□□□□□ -2.03
SDS3P40505 NOP10YHR072W-A 177 nt2.38□□□□□ -2.03
SDS3P40505 RPL34BYIL052C 366 nt2.38□□□□□ -2.03
SDS3P40505 YEL043WYEL043W 2871 nt2.38□□□□□ -2.03
SDS3P40505 MPT5YGL178W 2580 nt2.37□□□□□ -2.03
SDS3P40505 YOR161W-BYOR161W-B 261 nt2.37□□□□□ -2.03
SDS3P40505 KAP123YER110C 3342 nt2.37□□□□□ -2.03
SDS3P40505 UTP22YGR090W 3714 nt2.37□□□□□ -2.03
SDS3P40505 IRC8YJL051W 2469 nt2.36□□□□□ -2.03
SDS3P40505 YBR184WYBR184W 1572 nt2.36□□□□□ -2.03
SDS3P40505 HRD3YLR207W 2502 nt2.36□□□□□ -2.03
SDS3P40505 AMS1YGL156W 3252 nt2.36□□□□□ -2.03
SDS3P40505 PRP42YDR235W 1635 nt2.36□□□□□ -2.03
SDS3P40505 YJL052C-AYJL052C-A 120 nt2.36□□□□□ -2.03
SDS3P40505 YLR146W-AYLR146W-A 189 nt2.36□□□□□ -2.03
SDS3P40505 SNF5YBR289W 2718 nt2.36□□□□□ -2.03
SDS3P40505 DNF1YER166W 4716 nt2.36□□□□□ -2.03
SDS3P40505 SAP185YJL098W 3177 nt2.35□□□□□ -2.03
SDS3P40505 ATG11YPR049C 3537 nt2.35□□□□□ -2.03
SDS3P40505 YBL109WYBL109W 336 nt2.35□□□□□ -2.03
SDS3P40505 YOR329W-AYOR329W-A 210 nt2.35□□□□□ -2.03
SDS3P40505 YLL007CYLL007C 1998 nt2.35□□□□□ -2.03
SDS3P40505 PRP6YBR055C 2700 nt2.34□□□□□ -2.03
SDS3P40505 SMY1YKL079W 1971 nt2.34□□□□□ -2.03
SDS3P40505 PEP3YLR148W 2757 nt2.34□□□□□ -2.03
SDS3P40505 ECM12YHR021W-A 456 nt2.34□□□□□ -2.03
SDS3P40505 RPB10YOR210W 213 nt2.34□□□□□ -2.03
SDS3P40505 PMP1YCR024C-A 123 nt2.33□□□□□ -2.04
SDS3P40505 snR72snR72 98 nt2.33□□□□□ -2.04
SDS3P40505 FMP16YDR070C 282 nt2.33□□□□□ -2.04
SDS3P40505 YOR218CYOR218C 420 nt2.33□□□□□ -2.04
SDS3P40505 RPL42BYHR141C 321 nt2.32□□□□□ -2.04
SDS3P40505 ATP7YKL016C 525 nt2.32□□□□□ -2.04
SDS3P40505 YNL114CYNL114C 372 nt2.32□□□□□ -2.04
SDS3P40505 RPL42AYNL162W 321 nt2.32□□□□□ -2.04
SDS3P40505 MCM10YIL150C 1716 nt2.31□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 111.4 ms