Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 RTT101YJL047C 2529 nt1.8□□□□□ -2.12
VPS52P39904 PXA2YKL188C 2562 nt1.8□□□□□ -2.12
VPS52P39904 RIM20YOR275C 1986 nt1.8□□□□□ -2.12
VPS52P39904 SEC31YDL195W 3822 nt1.8□□□□□ -2.12
VPS52P39904 YFL063WYFL063W 456 nt1.8□□□□□ -2.12
VPS52P39904 YKR075W-AYKR075W-A 270 nt1.8□□□□□ -2.12
VPS52P39904 CYB5YNL111C 363 nt1.8□□□□□ -2.12
VPS52P39904 NUT2YPR168W 474 nt1.8□□□□□ -2.12
VPS52P39904 RPH1YER169W 2391 nt1.8□□□□□ -2.12
VPS52P39904 SWI5YDR146C 2130 nt1.79□□□□□ -2.12
VPS52P39904 RPL38YLR325C 237 nt1.79□□□□□ -2.12
VPS52P39904 FMP23YBR047W 528 nt1.79□□□□□ -2.12
VPS52P39904 NOP53YPL146C 1368 nt1.79□□□□□ -2.12
VPS52P39904 HDA3YPR179C 1968 nt1.79□□□□□ -2.12
VPS52P39904 MYO2YOR326W 4725 nt1.79□□□□□ -2.12
VPS52P39904 SYH1YPL105C 2550 nt1.78□□□□□ -2.12
VPS52P39904 TFC8YPL007C 1767 nt1.78□□□□□ -2.12
VPS52P39904 YGL149WYGL149W 306 nt1.78□□□□□ -2.12
VPS52P39904 DNF3YMR162C 4971 nt1.78□□□□□ -2.12
VPS52P39904 NAM7YMR080C 2916 nt1.78□□□□□ -2.12
VPS52P39904 PET309YLR067C 2898 nt1.78□□□□□ -2.12
VPS52P39904 RPL37BYDR500C 267 nt1.77□□□□□ -2.13
VPS52P39904 CYC7YEL039C 342 nt1.77□□□□□ -2.13
VPS52P39904 YAR029WYAR029W 225 nt1.77□□□□□ -2.13
VPS52P39904 UPS1YLR193C 528 nt1.77□□□□□ -2.13
VPS52P39904 YML007C-AYML007C-A 111 nt1.77□□□□□ -2.13
VPS52P39904 YOP1YPR028W 543 nt1.77□□□□□ -2.13
VPS52P39904 PLC1YPL268W 2610 nt1.76□□□□□ -2.13
VPS52P39904 YDR048CYDR048C 315 nt1.76□□□□□ -2.13
VPS52P39904 PCC1YKR095W-A 267 nt1.75□□□□□ -2.13
VPS52P39904 PAU18YLL064C 363 nt1.75□□□□□ -2.13
VPS52P39904 TMA7YLR262C-A 195 nt1.75□□□□□ -2.13
VPS52P39904 PAU6YNR076W 363 nt1.75□□□□□ -2.13
VPS52P39904 RFX1YLR176C 2436 nt1.74□□□□□ -2.13
VPS52P39904 YCR022CYCR022C 345 nt1.74□□□□□ -2.13
VPS52P39904 ATG9YDL149W 2994 nt1.74□□□□□ -2.13
VPS52P39904 snR51snR51 107 nt1.74□□□□□ -2.13
VPS52P39904 MUK1YPL070W 1839 nt1.74□□□□□ -2.13
VPS52P39904 SLY1YDR189W 2001 nt1.74□□□□□ -2.13
VPS52P39904 CHC1YGL206C 4962 nt1.74□□□□□ -2.13
VPS52P39904 ARP7YPR034W 1434 nt1.74□□□□□ -2.13
VPS52P39904 HTL1YCR020W-B 237 nt1.73□□□□□ -2.13
VPS52P39904 NPC2YDL046W 522 nt1.73□□□□□ -2.13
VPS52P39904 YDR426CYDR426C 378 nt1.73□□□□□ -2.13
VPS52P39904 YHR073W-AYHR073W-A 177 nt1.73□□□□□ -2.13
VPS52P39904 MCM22YJR135C 720 nt1.73□□□□□ -2.13
VPS52P39904 YMR290W-AYMR290W-A 348 nt1.73□□□□□ -2.13
VPS52P39904 YCL046WYCL046W 324 nt1.73□□□□□ -2.13
VPS52P39904 MGA2YIR033W 3342 nt1.73□□□□□ -2.13
VPS52P39904 HCS1YKL017C 2052 nt1.73□□□□□ -2.13
VPS52P39904 IRC20YLR247C 4671 nt1.73□□□□□ -2.13
VPS52P39904 LYS14YDR034C 2373 nt1.72□□□□□ -2.13
VPS52P39904 CFT2YLR115W 2580 nt1.72□□□□□ -2.13
VPS52P39904 PDR8YLR266C 2106 nt1.72□□□□□ -2.13
VPS52P39904 YCR087C-AYCR087C-A 462 nt1.72□□□□□ -2.13
VPS52P39904 YER088C-AYER088C-A 324 nt1.72□□□□□ -2.13
VPS52P39904 YMR141W-AYMR141W-A 225 nt1.72□□□□□ -2.13
VPS52P39904 YPR010C-AYPR010C-A 219 nt1.72□□□□□ -2.13
VPS52P39904 ZRG17YNR039C 1818 nt1.72□□□□□ -2.13
VPS52P39904 BUD2YKL092C 3315 nt1.71□□□□□ -2.14
VPS52P39904 YGR265WYGR265W 411 nt1.71□□□□□ -2.14
VPS52P39904 YMR272W-BYMR272W-B 108 nt1.71□□□□□ -2.14
VPS52P39904 YPR002C-AYPR002C-A 198 nt1.71□□□□□ -2.14
VPS52P39904 DCP2YNL118C 2913 nt1.71□□□□□ -2.14
VPS52P39904 CAT2YML042W 2013 nt1.71□□□□□ -2.14
VPS52P39904 LRE1YCL051W 1752 nt1.7□□□□□ -2.14
VPS52P39904 HER1YOR227W 3741 nt1.7□□□□□ -2.14
VPS52P39904 YIL102CYIL102C 306 nt1.7□□□□□ -2.14
VPS52P39904 DBP6YNR038W 1890 nt1.7□□□□□ -2.14
VPS52P39904 RPB10YOR210W 213 nt1.7□□□□□ -2.14
VPS52P39904 YOR282WYOR282W 321 nt1.7□□□□□ -2.14
VPS52P39904 INP2YMR163C 2118 nt1.7□□□□□ -2.14
VPS52P39904 MAK10YEL053C 2202 nt1.7□□□□□ -2.14
VPS52P39904 YOR343W-BYOR343W-B 5313 nt1.69□□□□□ -2.14
VPS52P39904 YDR003W-AYDR003W-A 123 nt1.69□□□□□ -2.14
VPS52P39904 ZIP1YDR285W 2628 nt1.69□□□□□ -2.14
VPS52P39904 MVP1YMR004W 1536 nt1.68□□□□□ -2.14
VPS52P39904 CTR9YOL145C 3234 nt1.68□□□□□ -2.14
VPS52P39904 YHR210CYHR210C 1026 nt1.68□□□□□ -2.14
VPS52P39904 TRX1YLR043C 312 nt1.68□□□□□ -2.14
VPS52P39904 YGR250CYGR250C 2346 nt1.68□□□□□ -2.14
VPS52P39904 IRE1YHR079C 3348 nt1.68□□□□□ -2.14
VPS52P39904 MSC6YOR354C 2079 nt1.67□□□□□ -2.14
VPS52P39904 KIP1YBL063W 3336 nt1.66□□□□□ -2.14
VPS52P39904 MYO4YAL029C 4416 nt1.66□□□□□ -2.14
VPS52P39904 YLL032CYLL032C 2478 nt1.66□□□□□ -2.14
VPS52P39904 LHS1YKL073W 2646 nt1.65□□□□□ -2.15
VPS52P39904 YDR344CYDR344C 444 nt1.65□□□□□ -2.15
VPS52P39904 YIL032CYIL032C 357 nt1.65□□□□□ -2.15
VPS52P39904 HMI1YOL095C 2121 nt1.65□□□□□ -2.15
VPS52P39904 YPR063CYPR063C 423 nt1.65□□□□□ -2.15
VPS52P39904 UTP21YLR409C 2820 nt1.65□□□□□ -2.15
VPS52P39904 MSH5YDL154W 2706 nt1.65□□□□□ -2.15
VPS52P39904 FIG2YCR089W 4830 nt1.64□□□□□ -2.15
VPS52P39904 YHL042WYHL042W 453 nt1.64□□□□□ -2.15
VPS52P39904 tT(UGU)HtT(UGU)H 72 nt1.64□□□□□ -2.15
VPS52P39904 YJL135WYJL135W 318 nt1.64□□□□□ -2.15
VPS52P39904 SEY1YOR165W 2331 nt1.63□□□□□ -2.15
VPS52P39904 VPS15YBR097W 4365 nt1.63□□□□□ -2.15
VPS52P39904 TDA9YML081W 3756 nt1.63□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms