Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 JSN1YJR091C 3276 nt2.78□□□□□ -1.96
PEX28P38848 NIP100YPL174C 2607 nt2.78□□□□□ -1.96
PEX28P38848 snR72snR72 98 nt2.78□□□□□ -1.96
PEX28P38848 RPS27BYHR021C 249 nt2.78□□□□□ -1.96
PEX28P38848 YPL150WYPL150W 2706 nt2.78□□□□□ -1.96
PEX28P38848 PMR1YGL167C 2853 nt2.78□□□□□ -1.97
PEX28P38848 YHR073W-AYHR073W-A 177 nt2.77□□□□□ -1.97
PEX28P38848 UTP14YML093W 2700 nt2.77□□□□□ -1.97
PEX28P38848 MSB2YGR014W 3921 nt2.77□□□□□ -1.97
PEX28P38848 YBL005W-BYBL005W-B 5268 nt2.77□□□□□ -1.97
PEX28P38848 AMS1YGL156W 3252 nt2.76□□□□□ -1.97
PEX28P38848 EMP24YGL200C 612 nt2.76□□□□□ -1.97
PEX28P38848 GEA1YJR031C 4227 nt2.76□□□□□ -1.97
PEX28P38848 SWR1YDR334W 4545 nt2.76□□□□□ -1.97
PEX28P38848 VMR1YHL035C 4779 nt2.76□□□□□ -1.97
PEX28P38848 LYS14YDR034C 2373 nt2.75□□□□□ -1.97
PEX28P38848 UBP14YBR058C 2346 nt2.75□□□□□ -1.97
PEX28P38848 YIL080WYIL080W 4722 nt2.75□□□□□ -1.97
PEX28P38848 YGR164WYGR164W 336 nt2.75□□□□□ -1.97
PEX28P38848 UBP1YDL122W 2430 nt2.75□□□□□ -1.97
PEX28P38848 CLN3YAL040C 1743 nt2.75□□□□□ -1.97
PEX28P38848 DRS2YAL026C 4068 nt2.74□□□□□ -1.97
PEX28P38848 BPT1YLL015W 4680 nt2.74□□□□□ -1.97
PEX28P38848 TOM1YDR457W 9807 nt2.74□□□□□ -1.97
PEX28P38848 YCR043CYCR043C 384 nt2.74□□□□□ -1.97
PEX28P38848 YHR071C-AYHR071C-A 321 nt2.74□□□□□ -1.97
PEX28P38848 YBR131C-AYBR131C-A 90 nt2.74□□□□□ -1.97
PEX28P38848 MOT1YPL082C 5604 nt2.74□□□□□ -1.97
PEX28P38848 LRE1YCL051W 1752 nt2.74□□□□□ -1.97
PEX28P38848 ATG13YPR185W 2217 nt2.73□□□□□ -1.97
PEX28P38848 SPC98YNL126W 2541 nt2.73□□□□□ -1.97
PEX28P38848 CAF120YNL278W 3183 nt2.73□□□□□ -1.97
PEX28P38848 ULI1YFR026C 510 nt2.73□□□□□ -1.97
PEX28P38848 YOR394C-AYOR394C-A 168 nt2.73□□□□□ -1.97
PEX28P38848 snR52snR52 92 nt2.73□□□□□ -1.97
PEX28P38848 VTC3YPL019C 2508 nt2.73□□□□□ -1.97
PEX28P38848 ECM12YHR021W-A 456 nt2.72□□□□□ -1.97
PEX28P38848 YHR032W-AYHR032W-A 180 nt2.72□□□□□ -1.97
PEX28P38848 MCM10YIL150C 1716 nt2.72□□□□□ -1.97
PEX28P38848 YBL012CYBL012C 402 nt2.72□□□□□ -1.97
PEX28P38848 YNL205CYNL205C 423 nt2.72□□□□□ -1.97
PEX28P38848 SWA2YDR320C 2007 nt2.71□□□□□ -1.98
PEX28P38848 MMS1YPR164W 4224 nt2.71□□□□□ -1.98
PEX28P38848 HYP2YEL034W 474 nt2.71□□□□□ -1.98
PEX28P38848 PAU8YAL068C 363 nt2.71□□□□□ -1.98
PEX28P38848 PAU18YLL064C 363 nt2.71□□□□□ -1.98
PEX28P38848 PAU6YNR076W 363 nt2.71□□□□□ -1.98
PEX28P38848 PAU20YOL161C 363 nt2.71□□□□□ -1.98
PEX28P38848 YOR381W-AYOR381W-A 168 nt2.71□□□□□ -1.98
PEX28P38848 MRD1YPR112C 2664 nt2.7□□□□□ -1.98
PEX28P38848 SPO75YLL005C 2607 nt2.7□□□□□ -1.98
PEX28P38848 RPO41YFL036W 4056 nt2.7□□□□□ -1.98
PEX28P38848 SRB8YCR081W 4284 nt2.69□□□□□ -1.98
PEX28P38848 SRP14YDL092W 441 nt2.69□□□□□ -1.98
PEX28P38848 YNL018CYNL018C 1839 nt2.69□□□□□ -1.98
PEX28P38848 TUS1YLR425W 3924 nt2.69□□□□□ -1.98
PEX28P38848 YLR278CYLR278C 4026 nt2.68□□□□□ -1.98
PEX28P38848 VTC1YER072W 390 nt2.68□□□□□ -1.98
PEX28P38848 MSC6YOR354C 2079 nt2.68□□□□□ -1.98
PEX28P38848 BNR1YIL159W 4128 nt2.68□□□□□ -1.98
PEX28P38848 FLO11YIR019C 4104 nt2.66□□□□□ -1.98
PEX28P38848 TRS130YMR218C 3309 nt2.66□□□□□ -1.98
PEX28P38848 snR85snR85 171 nt2.66□□□□□ -1.98
PEX28P38848 YIL020C-AYIL020C-A 339 nt2.66□□□□□ -1.98
PEX28P38848 COF1YLL050C 432 nt2.66□□□□□ -1.98
PEX28P38848 ELG1YOR144C 2376 nt2.66□□□□□ -1.98
PEX28P38848 YFR016CYFR016C 3702 nt2.66□□□□□ -1.98
PEX28P38848 SEC7YDR170C 6030 nt2.65□□□□□ -1.98
PEX28P38848 MNE1YOR350C 1992 nt2.65□□□□□ -1.98
PEX28P38848 VPS8YAL002W 3825 nt2.65□□□□□ -1.99
PEX28P38848 YOR072W-BYOR072W-B 162 nt2.65□□□□□ -1.99
PEX28P38848 YOR161W-BYOR161W-B 261 nt2.65□□□□□ -1.99
PEX28P38848 YBR174CYBR174C 315 nt2.65□□□□□ -1.99
PEX28P38848 YCL046WYCL046W 324 nt2.65□□□□□ -1.99
PEX28P38848 ZRG17YNR039C 1818 nt2.65□□□□□ -1.99
PEX28P38848 ATG11YPR049C 3537 nt2.64□□□□□ -1.99
PEX28P38848 RPL34BYIL052C 366 nt2.64□□□□□ -1.99
PEX28P38848 YLR154W-AYLR154W-A 186 nt2.64□□□□□ -1.99
PEX28P38848 SPO21YOL091W 1830 nt2.63□□□□□ -1.99
PEX28P38848 ISW1YBR245C 3390 nt2.63□□□□□ -1.99
PEX28P38848 MET18YIL128W 3099 nt2.63□□□□□ -1.99
PEX28P38848 YCR102W-AYCR102W-A 198 nt2.63□□□□□ -1.99
PEX28P38848 YDR182W-AYDR182W-A 204 nt2.63□□□□□ -1.99
PEX28P38848 YHR086W-AYHR086W-A 162 nt2.63□□□□□ -1.99
PEX28P38848 ESL1YIL151C 3357 nt2.63□□□□□ -1.99
PEX28P38848 SLH1YGR271W 5904 nt2.63□□□□□ -1.99
PEX28P38848 CUL3YGR003W 2235 nt2.62□□□□□ -1.99
PEX28P38848 PUT3YKL015W 2940 nt2.62□□□□□ -1.99
PEX28P38848 BCK1YJL095W 4437 nt2.62□□□□□ -1.99
PEX28P38848 TFC8YPL007C 1767 nt2.62□□□□□ -1.99
PEX28P38848 YDR003W-AYDR003W-A 123 nt2.62□□□□□ -1.99
PEX28P38848 SMC6YLR383W 3345 nt2.62□□□□□ -1.99
PEX28P38848 YEL073CYEL073C 324 nt2.61□□□□□ -1.99
PEX28P38848 YJL120WYJL120W 324 nt2.61□□□□□ -1.99
PEX28P38848 RPS25BYLR333C 327 nt2.61□□□□□ -1.99
PEX28P38848 YOR108C-AYOR108C-A 210 nt2.61□□□□□ -1.99
PEX28P38848 RLM1YPL089C 2031 nt2.61□□□□□ -1.99
PEX28P38848 NUP100YKL068W 2880 nt2.6□□□□□ -1.99
PEX28P38848 YDR209CYDR209C 414 nt2.6□□□□□ -1.99
PEX28P38848 YMR242W-AYMR242W-A 90 nt2.6□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 44.3 ms