Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 KAP120YPL125W 3099 nt0.9□□□□□ -2.27
CUE1P38428 LYS14YDR034C 2373 nt0.89□□□□□ -2.27
CUE1P38428 YGR045CYGR045C 363 nt0.89□□□□□ -2.27
CUE1P38428 TMA22YJR014W 597 nt0.89□□□□□ -2.27
CUE1P38428 YPR039WYPR039W 336 nt0.89□□□□□ -2.27
CUE1P38428 NUT2YPR168W 474 nt0.89□□□□□ -2.27
CUE1P38428 SCC2YDR180W 4482 nt0.88□□□□□ -2.27
CUE1P38428 YDR114CYDR114C 303 nt0.88□□□□□ -2.27
CUE1P38428 IRC23YOR044W 474 nt0.88□□□□□ -2.27
CUE1P38428 YBR012CYBR012C 420 nt0.88□□□□□ -2.27
CUE1P38428 ENV11YGR071C 2583 nt0.87□□□□□ -2.27
CUE1P38428 SMC1YFL008W 3678 nt0.87□□□□□ -2.27
CUE1P38428 PRM8YGL053W 714 nt0.87□□□□□ -2.27
CUE1P38428 YJR141WYJR141W 1044 nt0.87□□□□□ -2.27
CUE1P38428 BER1YLR412W 825 nt0.87□□□□□ -2.27
CUE1P38428 RUF22RUF22 515 nt0.87□□□□□ -2.27
CUE1P38428 IFH1YLR223C 3258 nt0.87□□□□□ -2.27
CUE1P38428 MPT5YGL178W 2580 nt0.87□□□□□ -2.27
CUE1P38428 YJR029WYJR029W 5268 nt0.87□□□□□ -2.27
CUE1P38428 YPR137C-BYPR137C-B 5268 nt0.87□□□□□ -2.27
CUE1P38428 YKL068W-AYKL068W-A 237 nt0.86□□□□□ -2.27
CUE1P38428 YMR175W-AYMR175W-A 195 nt0.86□□□□□ -2.27
CUE1P38428 YDL016CYDL016C 303 nt0.85□□□□□ -2.27
CUE1P38428 YFL012WYFL012W 447 nt0.85□□□□□ -2.27
CUE1P38428 YMR153C-AYMR153C-A 336 nt0.85□□□□□ -2.27
CUE1P38428 HCH1YNL281W 462 nt0.85□□□□□ -2.27
CUE1P38428 YBR221W-AYBR221W-A 105 nt0.85□□□□□ -2.27
CUE1P38428 SET3YKR029C 2256 nt0.85□□□□□ -2.27
CUE1P38428 YMR242W-AYMR242W-A 90 nt0.84□□□□□ -2.27
CUE1P38428 PXA2YKL188C 2562 nt0.84□□□□□ -2.28
CUE1P38428 NUP157YER105C 4176 nt0.84□□□□□ -2.28
CUE1P38428 YDR182W-AYDR182W-A 204 nt0.83□□□□□ -2.28
CUE1P38428 APQ13YJL075C 417 nt0.83□□□□□ -2.28
CUE1P38428 SAS3YBL052C 2496 nt0.82□□□□□ -2.28
CUE1P38428 ALY2YJL084C 3141 nt0.82□□□□□ -2.28
CUE1P38428 AI5_ALPHAQ0070 1893 nt0.82□□□□□ -2.28
CUE1P38428 OCA6YDR067C 675 nt0.82□□□□□ -2.28
CUE1P38428 CYC7YEL039C 342 nt0.82□□□□□ -2.28
CUE1P38428 YER135CYER135C 393 nt0.82□□□□□ -2.28
CUE1P38428 HUR1YGL168W 333 nt0.82□□□□□ -2.28
CUE1P38428 YLR146W-AYLR146W-A 189 nt0.82□□□□□ -2.28
CUE1P38428 RPL32YBL092W 393 nt0.82□□□□□ -2.28
CUE1P38428 ERP4YOR016C 624 nt0.82□□□□□ -2.28
CUE1P38428 SVS1YPL163C 783 nt0.82□□□□□ -2.28
CUE1P38428 YDL073WYDL073W 2955 nt0.81□□□□□ -2.28
CUE1P38428 YML009C-AYML009C-A 327 nt0.81□□□□□ -2.28
CUE1P38428 YNL319WYNL319W 441 nt0.81□□□□□ -2.28
CUE1P38428 SCW11YGL028C 1629 nt0.81□□□□□ -2.28
CUE1P38428 AIM9YER080W 1884 nt0.8□□□□□ -2.28
CUE1P38428 YER023C-AYER023C-A 213 nt0.8□□□□□ -2.28
CUE1P38428 NBL1YHR199C-A 222 nt0.79□□□□□ -2.28
CUE1P38428 RPL16AYIL133C 600 nt0.79□□□□□ -2.28
CUE1P38428 SDH2YLL041C 801 nt0.79□□□□□ -2.28
CUE1P38428 YOR029WYOR029W 336 nt0.79□□□□□ -2.28
CUE1P38428 YOR199WYOR199W 330 nt0.79□□□□□ -2.28
CUE1P38428 YBR200W-AYBR200W-A 165 nt0.79□□□□□ -2.28
CUE1P38428 YLL032CYLL032C 2478 nt0.79□□□□□ -2.28
CUE1P38428 STO1YMR125W 2586 nt0.78□□□□□ -2.28
CUE1P38428 SLD3YGL113W 2007 nt0.78□□□□□ -2.28
CUE1P38428 UPS1YLR193C 528 nt0.78□□□□□ -2.28
CUE1P38428 UBX4YMR067C 1251 nt0.78□□□□□ -2.28
CUE1P38428 snR13snR13 124 nt0.78□□□□□ -2.28
CUE1P38428 RCN2YOR220W 798 nt0.78□□□□□ -2.28
CUE1P38428 UTP20YBL004W 7482 nt0.78□□□□□ -2.28
CUE1P38428 PRP16YKR086W 3216 nt0.78□□□□□ -2.28
CUE1P38428 SLY1YDR189W 2001 nt0.77□□□□□ -2.29
CUE1P38428 YGR025WYGR025W 303 nt0.77□□□□□ -2.29
CUE1P38428 ILM1YJR118C 612 nt0.77□□□□□ -2.29
CUE1P38428 RPS30BYOR182C 192 nt0.77□□□□□ -2.29
CUE1P38428 SNU56YDR240C 1479 nt0.77□□□□□ -2.29
CUE1P38428 PAC1YOR269W 1485 nt0.77□□□□□ -2.29
CUE1P38428 AIM44YPL158C 2277 nt0.77□□□□□ -2.29
CUE1P38428 SWI6YLR182W 2412 nt0.77□□□□□ -2.29
CUE1P38428 RFX1YLR176C 2436 nt0.76□□□□□ -2.29
CUE1P38428 PDE2YOR360C 1581 nt0.76□□□□□ -2.29
CUE1P38428 YER076W-AYER076W-A 348 nt0.76□□□□□ -2.29
CUE1P38428 YGL239CYGL239C 315 nt0.76□□□□□ -2.29
CUE1P38428 MRPL31YKL138C 396 nt0.76□□□□□ -2.29
CUE1P38428 FIG4YNL325C 2640 nt0.76□□□□□ -2.29
CUE1P38428 YDL206WYDL206W 2289 nt0.76□□□□□ -2.29
CUE1P38428 YHR139C-AYHR139C-A 312 nt0.75□□□□□ -2.29
CUE1P38428 YIL059CYIL059C 366 nt0.75□□□□□ -2.29
CUE1P38428 PAU24YBR301W 363 nt0.75□□□□□ -2.29
CUE1P38428 LCD1YDR499W 2244 nt0.74□□□□□ -2.29
CUE1P38428 MET32YDR253C 576 nt0.74□□□□□ -2.29
CUE1P38428 YIL142C-AYIL142C-A 333 nt0.74□□□□□ -2.29
CUE1P38428 PAM16YJL104W 450 nt0.74□□□□□ -2.29
CUE1P38428 YBL029C-AYBL029C-A 285 nt0.74□□□□□ -2.29
CUE1P38428 MMS4YBR098W 2076 nt0.73□□□□□ -2.29
CUE1P38428 HMLALPHA2YCL067C 633 nt0.73□□□□□ -2.29
CUE1P38428 MATALPHA2YCR039C 633 nt0.73□□□□□ -2.29
CUE1P38428 YDL196WYDL196W 330 nt0.73□□□□□ -2.29
CUE1P38428 YAP3YHL009C 993 nt0.73□□□□□ -2.29
CUE1P38428 tR(UCU)Q1tR(UCU)Q1 73 nt0.73□□□□□ -2.29
CUE1P38428 RRT1YBL048W 312 nt0.73□□□□□ -2.29
CUE1P38428 MXR1YER042W 555 nt0.72□□□□□ -2.29
CUE1P38428 PHS1YJL097W 654 nt0.72□□□□□ -2.29
CUE1P38428 RIM20YOR275C 1986 nt0.71□□□□□ -2.3
CUE1P38428 YDR029WYDR029W 315 nt0.71□□□□□ -2.3
CUE1P38428 YDR269CYDR269C 324 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 53.6 ms