Protein–RNA interactions for Protein: P36026

UBP11, Ubiquitin carboxyl-terminal hydrolase 11, yeastyeast

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP11P36026 MYO4YAL029C 4416 nt1.84□□□□□ -2.11
UBP11P36026 RTR1YER139C 681 nt1.84□□□□□ -2.11
UBP11P36026 YAR053WYAR053W 297 nt1.84□□□□□ -2.11
UBP11P36026 BIL1YOR304C-A 231 nt1.84□□□□□ -2.11
UBP11P36026 PXA2YKL188C 2562 nt1.84□□□□□ -2.12
UBP11P36026 SEY1YOR165W 2331 nt1.83□□□□□ -2.12
UBP11P36026 YDL240C-AYDL240C-A 138 nt1.83□□□□□ -2.12
UBP11P36026 YHL037CYHL037C 402 nt1.83□□□□□ -2.12
UBP11P36026 YHR210CYHR210C 1026 nt1.83□□□□□ -2.12
UBP11P36026 PAU18YLL064C 363 nt1.83□□□□□ -2.12
UBP11P36026 PAU6YNR076W 363 nt1.83□□□□□ -2.12
UBP11P36026 SFB2YNL049C 2631 nt1.83□□□□□ -2.12
UBP11P36026 CTR9YOL145C 3234 nt1.82□□□□□ -2.12
UBP11P36026 tT(UGU)HtT(UGU)H 72 nt1.82□□□□□ -2.12
UBP11P36026 YPR016W-AYPR016W-A 261 nt1.82□□□□□ -2.12
UBP11P36026 OSH6YKR003W 1347 nt1.82□□□□□ -2.12
UBP11P36026 LHS1YKL073W 2646 nt1.82□□□□□ -2.12
UBP11P36026 ZRG17YNR039C 1818 nt1.82□□□□□ -2.12
UBP11P36026 PKH3YDR466W 2697 nt1.82□□□□□ -2.12
UBP11P36026 SWI6YLR182W 2412 nt1.81□□□□□ -2.12
UBP11P36026 MCM22YJR135C 720 nt1.81□□□□□ -2.12
UBP11P36026 MSH5YDL154W 2706 nt1.81□□□□□ -2.12
UBP11P36026 SWI5YDR146C 2130 nt1.81□□□□□ -2.12
UBP11P36026 EFR3YMR212C 2349 nt1.8□□□□□ -2.12
UBP11P36026 YOR072W-AYOR072W-A 249 nt1.8□□□□□ -2.12
UBP11P36026 YPL038W-AYPL038W-A 192 nt1.8□□□□□ -2.12
UBP11P36026 YCL046WYCL046W 324 nt1.8□□□□□ -2.12
UBP11P36026 YMR247W-AYMR247W-A 144 nt1.79□□□□□ -2.12
UBP11P36026 SAR1YPL218W 573 nt1.79□□□□□ -2.12
UBP11P36026 NUT2YPR168W 474 nt1.79□□□□□ -2.12
UBP11P36026 NOP53YPL146C 1368 nt1.79□□□□□ -2.12
UBP11P36026 IRE1YHR079C 3348 nt1.79□□□□□ -2.12
UBP11P36026 LYS14YDR034C 2373 nt1.78□□□□□ -2.12
UBP11P36026 MAK10YEL053C 2202 nt1.78□□□□□ -2.12
UBP11P36026 RLM1YPL089C 2031 nt1.78□□□□□ -2.12
UBP11P36026 RPL38YLR325C 237 nt1.78□□□□□ -2.12
UBP11P36026 NUP192YJL039C 5052 nt1.78□□□□□ -2.12
UBP11P36026 MDM20YOL076W 2391 nt1.78□□□□□ -2.12
UBP11P36026 RFX1YLR176C 2436 nt1.77□□□□□ -2.13
UBP11P36026 CTF4YPR135W 2784 nt1.77□□□□□ -2.13
UBP11P36026 YLR035C-AYLR035C-A 3468 nt1.77□□□□□ -2.13
UBP11P36026 SGO1YOR073W 1773 nt1.77□□□□□ -2.13
UBP11P36026 YCS4YLR272C 3531 nt1.76□□□□□ -2.13
UBP11P36026 MUK1YPL070W 1839 nt1.76□□□□□ -2.13
UBP11P36026 TRX1YLR043C 312 nt1.76□□□□□ -2.13
UBP11P36026 RKM1YPL208W 1752 nt1.76□□□□□ -2.13
UBP11P36026 SLY1YDR189W 2001 nt1.76□□□□□ -2.13
UBP11P36026 PAC1YOR269W 1485 nt1.75□□□□□ -2.13
UBP11P36026 UTP21YLR409C 2820 nt1.75□□□□□ -2.13
UBP11P36026 DNF3YMR162C 4971 nt1.75□□□□□ -2.13
UBP11P36026 CAT8YMR280C 4302 nt1.75□□□□□ -2.13
UBP11P36026 YBP1YBR216C 2025 nt1.74□□□□□ -2.13
UBP11P36026 PAU3YCR104W 375 nt1.74□□□□□ -2.13
UBP11P36026 CYC7YEL039C 342 nt1.74□□□□□ -2.13
UBP11P36026 tW(UCA)QtW(UCA)Q 74 nt1.74□□□□□ -2.13
UBP11P36026 MRPL31YKL138C 396 nt1.74□□□□□ -2.13
UBP11P36026 YOP1YPR028W 543 nt1.74□□□□□ -2.13
UBP11P36026 RIM20YOR275C 1986 nt1.74□□□□□ -2.13
UBP11P36026 DCP2YNL118C 2913 nt1.73□□□□□ -2.13
UBP11P36026 SBE22YHR103W 2559 nt1.73□□□□□ -2.13
UBP11P36026 KCS1YDR017C 3153 nt1.73□□□□□ -2.13
UBP11P36026 YDR003W-AYDR003W-A 123 nt1.73□□□□□ -2.13
UBP11P36026 YHL041WYHL041W 450 nt1.73□□□□□ -2.13
UBP11P36026 HMI1YOL095C 2121 nt1.73□□□□□ -2.13
UBP11P36026 ZIP1YDR285W 2628 nt1.72□□□□□ -2.13
UBP11P36026 MYO2YOR326W 4725 nt1.72□□□□□ -2.13
UBP11P36026 RPL31AYDL075W 342 nt1.72□□□□□ -2.13
UBP11P36026 YDR102CYDR102C 333 nt1.72□□□□□ -2.13
UBP11P36026 RPL40BYKR094C 387 nt1.72□□□□□ -2.13
UBP11P36026 UPS1YLR193C 528 nt1.72□□□□□ -2.13
UBP11P36026 CDC31YOR257W 486 nt1.72□□□□□ -2.13
UBP11P36026 TIM18YOR297C 579 nt1.72□□□□□ -2.13
UBP11P36026 ENV11YGR071C 2583 nt1.71□□□□□ -2.14
UBP11P36026 SKI3YPR189W 4299 nt1.71□□□□□ -2.14
UBP11P36026 YHR007C-AYHR007C-A 216 nt1.71□□□□□ -2.14
UBP11P36026 PFD1YJL179W 330 nt1.71□□□□□ -2.14
UBP11P36026 YAF9YNL107W 681 nt1.71□□□□□ -2.14
UBP11P36026 FRK1YPL141C 2598 nt1.71□□□□□ -2.14
UBP11P36026 HSL1YKL101W 4557 nt1.7□□□□□ -2.14
UBP11P36026 YML007C-AYML007C-A 111 nt1.7□□□□□ -2.14
UBP11P36026 YLR422WYLR422W 5799 nt1.7□□□□□ -2.14
UBP11P36026 YLL032CYLL032C 2478 nt1.69□□□□□ -2.14
UBP11P36026 MON2YNL297C 4911 nt1.69□□□□□ -2.14
UBP11P36026 MLH3YPL164C 2148 nt1.69□□□□□ -2.14
UBP11P36026 FIG2YCR089W 4830 nt1.69□□□□□ -2.14
UBP11P36026 CSN9YDR179C 489 nt1.68□□□□□ -2.14
UBP11P36026 YKL136WYKL136W 399 nt1.68□□□□□ -2.14
UBP11P36026 snR51snR51 107 nt1.68□□□□□ -2.14
UBP11P36026 DGR2YKL121W 2559 nt1.68□□□□□ -2.14
UBP11P36026 YKL118WYKL118W 312 nt1.67□□□□□ -2.14
UBP11P36026 PCC1YKR095W-A 267 nt1.67□□□□□ -2.14
UBP11P36026 TAR1YLR154W-C 375 nt1.67□□□□□ -2.14
UBP11P36026 YMR141W-AYMR141W-A 225 nt1.67□□□□□ -2.14
UBP11P36026 YPL225WYPL225W 441 nt1.67□□□□□ -2.14
UBP11P36026 INP2YMR163C 2118 nt1.67□□□□□ -2.14
UBP11P36026 VPS15YBR097W 4365 nt1.67□□□□□ -2.14
UBP11P36026 YDR169C-AYDR169C-A 150 nt1.66□□□□□ -2.14
UBP11P36026 YMR230W-AYMR230W-A 189 nt1.66□□□□□ -2.14
UBP11P36026 APL2YKL135C 2181 nt1.66□□□□□ -2.14
UBP11P36026 PIG1YLR273C 1947 nt1.66□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms