Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA6P31267 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HOXA6P31267 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HOXA6P31267 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA6P31267 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
HOXA6P31267 HLA-G-202ENST00000376815 851 ntBASIC20.05■□□□□ 0.8
HOXA6P31267 HLA-G-203ENST00000376818 1127 ntBASIC20.05■□□□□ 0.8
HOXA6P31267 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA6P31267 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
HOXA6P31267 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA6P31267 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA6P31267 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA6P31267 AC026271.3-201ENST00000571884 352 ntBASIC20.05■□□□□ 0.8
HOXA6P31267 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.05■□□□□ 0.8
HOXA6P31267 MIR2861-201ENST00000636310 90 ntBASIC20.05■□□□□ 0.8
HOXA6P31267 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA6P31267 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 AP005242.2-201ENST00000580065 1175 ntBASIC20.04■□□□□ 0.8
HOXA6P31267 AL031985.4-201ENST00000642138 673 ntBASIC20.04■□□□□ 0.8
HOXA6P31267 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA6P31267 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HOXA6P31267 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA6P31267 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HOXA6P31267 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA6P31267 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.03■□□□□ 0.8
HOXA6P31267 EGLN1P1-201ENST00000531623 762 ntBASIC20.03■□□□□ 0.8
HOXA6P31267 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.03■□□□□ 0.8
HOXA6P31267 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HOXA6P31267 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA6P31267 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA6P31267 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA6P31267 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA6P31267 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.03■□□□□ 0.8
HOXA6P31267 FSCN1P1-201ENST00000568912 1481 ntBASIC20.03■□□□□ 0.8
HOXA6P31267 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA6P31267 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA6P31267 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA6P31267 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA6P31267 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
HOXA6P31267 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HOXA6P31267 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA6P31267 C2orf69P3-201ENST00000565542 1120 ntBASIC20.02■□□□□ 0.8
HOXA6P31267 AC087388.1-201ENST00000571370 1112 ntBASIC20.02■□□□□ 0.8
HOXA6P31267 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA6P31267 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA6P31267 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA6P31267 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HOXA6P31267 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA6P31267 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.02■□□□□ 0.79
HOXA6P31267 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA6P31267 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.02■□□□□ 0.79
HOXA6P31267 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA6P31267 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA6P31267 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.02■□□□□ 0.79
HOXA6P31267 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXA6P31267 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA6P31267 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA6P31267 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXA6P31267 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA6P31267 TSPY14P-201ENST00000303979 915 ntBASIC20.01■□□□□ 0.79
HOXA6P31267 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.01■□□□□ 0.79
HOXA6P31267 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA6P31267 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXA6P31267 DGCR10-201ENST00000609839 495 ntBASIC20.01■□□□□ 0.79
HOXA6P31267 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXA6P31267 AC242852.2-201ENST00000615738 1807 ntBASIC20.01■□□□□ 0.79
HOXA6P31267 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA6P31267 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXA6P31267 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20■□□□□ 0.79
HOXA6P31267 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXA6P31267 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20■□□□□ 0.79
HOXA6P31267 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms