Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 AC116562.4-201ENST00000641316 2276 ntBASIC19.28■□□□□ 0.68
HTR1EP28566 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HTR1EP28566 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.27■□□□□ 0.68
HTR1EP28566 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 AC142086.2-201ENST00000569753 217 ntBASIC19.27■□□□□ 0.68
HTR1EP28566 AL121832.2-201ENST00000610979 668 ntBASIC19.27■□□□□ 0.68
HTR1EP28566 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.27■□□□□ 0.68
HTR1EP28566 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 AC125437.2-201ENST00000625180 2167 ntBASIC19.27■□□□□ 0.68
HTR1EP28566 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1EP28566 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HTR1EP28566 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HTR1EP28566 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HTR1EP28566 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.26■□□□□ 0.67
HTR1EP28566 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.26■□□□□ 0.67
HTR1EP28566 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.26■□□□□ 0.67
HTR1EP28566 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTR1EP28566 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HTR1EP28566 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.25■□□□□ 0.67
HTR1EP28566 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.25■□□□□ 0.67
HTR1EP28566 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.25■□□□□ 0.67
HTR1EP28566 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.25■□□□□ 0.67
HTR1EP28566 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.25■□□□□ 0.67
HTR1EP28566 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.25■□□□□ 0.67
HTR1EP28566 AC079140.4-201ENST00000507448 529 ntBASIC19.25■□□□□ 0.67
HTR1EP28566 KRT18P6-201ENST00000555540 1265 ntBASIC19.25■□□□□ 0.67
HTR1EP28566 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.25■□□□□ 0.67
HTR1EP28566 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HTR1EP28566 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.25■□□□□ 0.67
HTR1EP28566 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HTR1EP28566 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTR1EP28566 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HTR1EP28566 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HTR1EP28566 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HTR1EP28566 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HTR1EP28566 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.24■□□□□ 0.67
HTR1EP28566 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
HTR1EP28566 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.24■□□□□ 0.67
HTR1EP28566 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 AC083906.2-201ENST00000511578 360 ntBASIC19.24■□□□□ 0.67
HTR1EP28566 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HTR1EP28566 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.24■□□□□ 0.67
HTR1EP28566 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.24■□□□□ 0.67
HTR1EP28566 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HTR1EP28566 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HTR1EP28566 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HTR1EP28566 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.24■□□□□ 0.67
HTR1EP28566 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.24■□□□□ 0.67
HTR1EP28566 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTR1EP28566 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
HTR1EP28566 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
HTR1EP28566 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.23■□□□□ 0.67
HTR1EP28566 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.23■□□□□ 0.67
HTR1EP28566 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms