Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 snR45snR45 172 nt0.45□□□□□ -2.34
CDC39P25655 TBS1YBR150C 3285 nt0.45□□□□□ -2.34
CDC39P25655 NPR2YEL062W 1848 nt0.44□□□□□ -2.34
CDC39P25655 LRP1YHR081W 555 nt0.44□□□□□ -2.34
CDC39P25655 ATP20YPR020W 348 nt0.44□□□□□ -2.34
CDC39P25655 IFH1YLR223C 3258 nt0.44□□□□□ -2.34
CDC39P25655 YDL152WYDL152W 366 nt0.44□□□□□ -2.34
CDC39P25655 RSM27YGR215W 333 nt0.44□□□□□ -2.34
CDC39P25655 YMR324CYMR324C 243 nt0.44□□□□□ -2.34
CDC39P25655 YBR121C-AYBR121C-A 159 nt0.44□□□□□ -2.34
CDC39P25655 STO1YMR125W 2586 nt0.44□□□□□ -2.34
CDC39P25655 MMS4YBR098W 2076 nt0.44□□□□□ -2.34
CDC39P25655 IQG1YPL242C 4488 nt0.43□□□□□ -2.34
CDC39P25655 YDR008CYDR008C 351 nt0.43□□□□□ -2.34
CDC39P25655 YGR290WYGR290W 444 nt0.43□□□□□ -2.34
CDC39P25655 YIR021W-AYIR021W-A 213 nt0.43□□□□□ -2.34
CDC39P25655 YBR012CYBR012C 420 nt0.43□□□□□ -2.34
CDC39P25655 BUD3YCL014W 4911 nt0.43□□□□□ -2.34
CDC39P25655 BI4Q0120 1917 nt0.43□□□□□ -2.34
CDC39P25655 PIG1YLR273C 1947 nt0.43□□□□□ -2.34
CDC39P25655 SWF1YDR126W 1011 nt0.42□□□□□ -2.34
CDC39P25655 YMR272W-AYMR272W-A 114 nt0.42□□□□□ -2.34
CDC39P25655 YPL197CYPL197C 414 nt0.42□□□□□ -2.34
CDC39P25655 PAN3YKL025C 2040 nt0.42□□□□□ -2.34
CDC39P25655 RPL9AYGL147C 576 nt0.41□□□□□ -2.34
CDC39P25655 TIM10YHR005C-A 282 nt0.41□□□□□ -2.34
CDC39P25655 NUT2YPR168W 474 nt0.41□□□□□ -2.34
CDC39P25655 snR5snR5 204 nt0.41□□□□□ -2.34
CDC39P25655 snR79snR79 84 nt0.41□□□□□ -2.34
CDC39P25655 YIR020CYIR020C 303 nt0.41□□□□□ -2.34
CDC39P25655 BUL2YML111W 2763 nt0.41□□□□□ -2.34
CDC39P25655 YMR153C-AYMR153C-A 336 nt0.41□□□□□ -2.34
CDC39P25655 YML002WYML002W 2214 nt0.41□□□□□ -2.34
CDC39P25655 SLY1YDR189W 2001 nt0.4□□□□□ -2.35
CDC39P25655 RKR1YMR247C 4689 nt0.4□□□□□ -2.35
CDC39P25655 SWT1YOR166C 1377 nt0.4□□□□□ -2.35
CDC39P25655 LCD1YDR499W 2244 nt0.39□□□□□ -2.35
CDC39P25655 IES5YER092W 378 nt0.39□□□□□ -2.35
CDC39P25655 KAP122YGL016W 3246 nt0.39□□□□□ -2.35
CDC39P25655 YGR265WYGR265W 411 nt0.38□□□□□ -2.35
CDC39P25655 YHR063W-AYHR063W-A 336 nt0.38□□□□□ -2.35
CDC39P25655 HYM1YKL189W 1200 nt0.38□□□□□ -2.35
CDC39P25655 YMR013C-AYMR013C-A 150 nt0.38□□□□□ -2.35
CDC39P25655 RUF22RUF22 515 nt0.38□□□□□ -2.35
CDC39P25655 YPR170CYPR170C 336 nt0.38□□□□□ -2.35
CDC39P25655 LYS14YDR034C 2373 nt0.38□□□□□ -2.35
CDC39P25655 SPO23YBR250W 1572 nt0.37□□□□□ -2.35
CDC39P25655 RPL38YLR325C 237 nt0.37□□□□□ -2.35
CDC39P25655 UBS1YBR165W 834 nt0.37□□□□□ -2.35
CDC39P25655 SLM6YBR266C 453 nt0.37□□□□□ -2.35
CDC39P25655 PDE2YOR360C 1581 nt0.37□□□□□ -2.35
CDC39P25655 YFR057WYFR057W 456 nt0.37□□□□□ -2.35
CDC39P25655 ECM12YHR021W-A 456 nt0.37□□□□□ -2.35
CDC39P25655 CSM4YPL200W 471 nt0.37□□□□□ -2.35
CDC39P25655 YJL047C-AYJL047C-A 135 nt0.36□□□□□ -2.35
CDC39P25655 YNL146C-AYNL146C-A 195 nt0.36□□□□□ -2.35
CDC39P25655 YOR248WYOR248W 303 nt0.36□□□□□ -2.35
CDC39P25655 YER078W-AYER078W-A 165 nt0.35□□□□□ -2.35
CDC39P25655 YHR139C-AYHR139C-A 312 nt0.35□□□□□ -2.35
CDC39P25655 PRP21YJL203W 843 nt0.35□□□□□ -2.35
CDC39P25655 VAM3YOR106W 852 nt0.35□□□□□ -2.35
CDC39P25655 PKH2YOL100W 3246 nt0.35□□□□□ -2.35
CDC39P25655 TAD1YGL243W 1203 nt0.35□□□□□ -2.35
CDC39P25655 TIM13YGR181W 318 nt0.35□□□□□ -2.35
CDC39P25655 DBP6YNR038W 1890 nt0.35□□□□□ -2.35
CDC39P25655 MKT1YNL085W 2493 nt0.35□□□□□ -2.35
CDC39P25655 BMT5YIL096C 1011 nt0.34□□□□□ -2.35
CDC39P25655 AI5_ALPHAQ0070 1893 nt0.33□□□□□ -2.36
CDC39P25655 OCA6YDR067C 675 nt0.33□□□□□ -2.36
CDC39P25655 SPO11YHL022C 1197 nt0.33□□□□□ -2.36
CDC39P25655 YLR271WYLR271W 825 nt0.33□□□□□ -2.36
CDC39P25655 RRT1YBL048W 312 nt0.33□□□□□ -2.36
CDC39P25655 YGL015CYGL015C 393 nt0.32□□□□□ -2.36
CDC39P25655 LSO2YGR169C-A 279 nt0.32□□□□□ -2.36
CDC39P25655 SPC2YML055W 537 nt0.32□□□□□ -2.36
CDC39P25655 SLI15YBR156C 2097 nt0.32□□□□□ -2.36
CDC39P25655 SAC3YDR159W 3906 nt0.32□□□□□ -2.36
CDC39P25655 SRP14YDL092W 441 nt0.32□□□□□ -2.36
CDC39P25655 KAR1YNL188W 1302 nt0.32□□□□□ -2.36
CDC39P25655 PAN2YGL094C 3348 nt0.31□□□□□ -2.36
CDC39P25655 MXR1YER042W 555 nt0.31□□□□□ -2.36
CDC39P25655 YPR096CYPR096C 303 nt0.31□□□□□ -2.36
CDC39P25655 BEM3YPL115C 3387 nt0.31□□□□□ -2.36
CDC39P25655 PPN1YDR452W 2025 nt0.31□□□□□ -2.36
CDC39P25655 ISD11YER048W-A 285 nt0.31□□□□□ -2.36
CDC39P25655 HUR1YGL168W 333 nt0.3□□□□□ -2.36
CDC39P25655 PMP1YCR024C-A 123 nt0.29□□□□□ -2.36
CDC39P25655 YGL230CYGL230C 444 nt0.29□□□□□ -2.36
CDC39P25655 RPC10YHR143W-A 213 nt0.29□□□□□ -2.36
CDC39P25655 YJL113WYJL113W 4647 nt0.29□□□□□ -2.36
CDC39P25655 TAH1YCR060W 336 nt0.29□□□□□ -2.36
CDC39P25655 YER138W-AYER138W-A 105 nt0.29□□□□□ -2.36
CDC39P25655 YJL135WYJL135W 318 nt0.29□□□□□ -2.36
CDC39P25655 YBL107W-AYBL107W-A 105 nt0.29□□□□□ -2.36
CDC39P25655 PET111YMR257C 2403 nt0.29□□□□□ -2.36
CDC39P25655 YBR071WYBR071W 636 nt0.28□□□□□ -2.36
CDC39P25655 MLP2YIL149C 5040 nt0.28□□□□□ -2.36
CDC39P25655 BFR2YDR299W 1605 nt0.28□□□□□ -2.36
CDC39P25655 YBR184WYBR184W 1572 nt0.28□□□□□ -2.37
CDC39P25655 YDR182W-AYDR182W-A 204 nt0.28□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 37.8 ms