Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
NR4A1P22736 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
NR4A1P22736 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.65■□□□□ 0.58
NR4A1P22736 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.65■□□□□ 0.58
NR4A1P22736 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.65■□□□□ 0.58
NR4A1P22736 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.65■□□□□ 0.58
NR4A1P22736 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.65■□□□□ 0.58
NR4A1P22736 LINC02228-203ENST00000641970 1355 ntBASIC18.65■□□□□ 0.58
NR4A1P22736 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A1P22736 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NR4A1P22736 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NR4A1P22736 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.64■□□□□ 0.58
NR4A1P22736 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.58
NR4A1P22736 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR4A1P22736 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NR4A1P22736 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.64■□□□□ 0.57
NR4A1P22736 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NR4A1P22736 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NR4A1P22736 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A1P22736 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.63■□□□□ 0.57
NR4A1P22736 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NR4A1P22736 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.63■□□□□ 0.57
NR4A1P22736 FP700111.2-201ENST00000619190 1892 ntBASIC18.63■□□□□ 0.57
NR4A1P22736 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NR4A1P22736 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NR4A1P22736 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A1P22736 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.63■□□□□ 0.57
NR4A1P22736 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.63■□□□□ 0.57
NR4A1P22736 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NR4A1P22736 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.63■□□□□ 0.57
NR4A1P22736 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 AC125437.2-201ENST00000625180 2167 ntBASIC18.63■□□□□ 0.57
NR4A1P22736 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
NR4A1P22736 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A1P22736 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A1P22736 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.63■□□□□ 0.57
NR4A1P22736 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
NR4A1P22736 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.62■□□□□ 0.57
NR4A1P22736 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.62■□□□□ 0.57
NR4A1P22736 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NR4A1P22736 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NR4A1P22736 TPRG1LP1-201ENST00000598702 760 ntBASIC18.62■□□□□ 0.57
NR4A1P22736 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NR4A1P22736 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.62■□□□□ 0.57
NR4A1P22736 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
NR4A1P22736 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NR4A1P22736 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.62■□□□□ 0.57
NR4A1P22736 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NR4A1P22736 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A1P22736 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NR4A1P22736 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.61■□□□□ 0.57
NR4A1P22736 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NR4A1P22736 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 AC034268.1-201ENST00000441047 882 ntBASIC18.61■□□□□ 0.57
NR4A1P22736 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
NR4A1P22736 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms