Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NFKB1P19838 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
NFKB1P19838 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.55■□□□□ 0.88
NFKB1P19838 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKB1P19838 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
NFKB1P19838 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 AL512625.2-201ENST00000417533 625 ntBASIC20.54■□□□□ 0.88
NFKB1P19838 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 AC133552.2-202ENST00000575694 574 ntBASIC20.54■□□□□ 0.88
NFKB1P19838 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKB1P19838 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NFKB1P19838 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKB1P19838 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKB1P19838 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKB1P19838 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.53■□□□□ 0.88
NFKB1P19838 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.53■□□□□ 0.88
NFKB1P19838 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.53■□□□□ 0.88
NFKB1P19838 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.53■□□□□ 0.88
NFKB1P19838 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.53■□□□□ 0.88
NFKB1P19838 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKB1P19838 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.53■□□□□ 0.88
NFKB1P19838 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.53■□□□□ 0.88
NFKB1P19838 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKB1P19838 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKB1P19838 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.53■□□□□ 0.88
NFKB1P19838 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKB1P19838 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKB1P19838 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKB1P19838 KRT17P1-201ENST00000399211 1546 ntBASIC20.53■□□□□ 0.88
NFKB1P19838 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFKB1P19838 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFKB1P19838 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFKB1P19838 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFKB1P19838 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFKB1P19838 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.52■□□□□ 0.88
NFKB1P19838 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFKB1P19838 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFKB1P19838 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.52■□□□□ 0.87
NFKB1P19838 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NFKB1P19838 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NFKB1P19838 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NFKB1P19838 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NFKB1P19838 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.51■□□□□ 0.87
NFKB1P19838 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
NFKB1P19838 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.51■□□□□ 0.87
NFKB1P19838 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.51■□□□□ 0.87
NFKB1P19838 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.51■□□□□ 0.87
NFKB1P19838 AC105036.2-201ENST00000569468 176 ntBASIC20.51■□□□□ 0.87
NFKB1P19838 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.51■□□□□ 0.87
NFKB1P19838 AC092666.2-201ENST00000613287 246 ntBASIC20.51■□□□□ 0.87
NFKB1P19838 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.51■□□□□ 0.87
NFKB1P19838 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.51■□□□□ 0.87
NFKB1P19838 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFKB1P19838 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.51■□□□□ 0.87
NFKB1P19838 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.51■□□□□ 0.87
NFKB1P19838 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.51■□□□□ 0.87
NFKB1P19838 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NFKB1P19838 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.5■□□□□ 0.87
NFKB1P19838 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 AF201337.1-201ENST00000520239 748 ntBASIC20.5■□□□□ 0.87
NFKB1P19838 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.5■□□□□ 0.87
NFKB1P19838 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.5■□□□□ 0.87
NFKB1P19838 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.5■□□□□ 0.87
NFKB1P19838 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NFKB1P19838 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
NFKB1P19838 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms