Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
ATF1P18846 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ATF1P18846 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.67■□□□□ 0.42
ATF1P18846 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATF1P18846 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ATF1P18846 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.67■□□□□ 0.42
ATF1P18846 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 AC005332.7-201ENST00000614046 2005 ntBASIC17.67■□□□□ 0.42
ATF1P18846 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATF1P18846 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATF1P18846 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ATF1P18846 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.66■□□□□ 0.42
ATF1P18846 DUX4L2-201ENST00000561772 1275 ntBASIC17.66■□□□□ 0.42
ATF1P18846 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.66■□□□□ 0.42
ATF1P18846 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.66■□□□□ 0.42
ATF1P18846 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
ATF1P18846 DUX4L6-201ENST00000626483 1275 ntBASIC17.66■□□□□ 0.42
ATF1P18846 DUX4L1-201ENST00000627662 1275 ntBASIC17.66■□□□□ 0.42
ATF1P18846 DUX4L8-201ENST00000629013 1275 ntBASIC17.66■□□□□ 0.42
ATF1P18846 DUX4L3-201ENST00000630187 1275 ntBASIC17.66■□□□□ 0.42
ATF1P18846 DUX4L7-201ENST00000630678 1275 ntBASIC17.66■□□□□ 0.42
ATF1P18846 DUX4L5-201ENST00000630834 1275 ntBASIC17.66■□□□□ 0.42
ATF1P18846 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.66■□□□□ 0.42
ATF1P18846 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.66■□□□□ 0.42
ATF1P18846 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.66■□□□□ 0.42
ATF1P18846 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF1P18846 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.65■□□□□ 0.42
ATF1P18846 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ATF1P18846 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.65■□□□□ 0.42
ATF1P18846 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.65■□□□□ 0.42
ATF1P18846 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATF1P18846 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.65■□□□□ 0.42
ATF1P18846 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.65■□□□□ 0.42
ATF1P18846 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.65■□□□□ 0.42
ATF1P18846 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.65■□□□□ 0.42
ATF1P18846 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ATF1P18846 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.65■□□□□ 0.42
ATF1P18846 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF1P18846 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.65■□□□□ 0.42
ATF1P18846 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATF1P18846 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.64■□□□□ 0.42
ATF1P18846 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
ATF1P18846 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ATF1P18846 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
ATF1P18846 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.64■□□□□ 0.41
ATF1P18846 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.64■□□□□ 0.41
ATF1P18846 AC104187.1-201ENST00000607510 612 ntBASIC17.64■□□□□ 0.41
ATF1P18846 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.64■□□□□ 0.41
ATF1P18846 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
ATF1P18846 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.64■□□□□ 0.41
ATF1P18846 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ATF1P18846 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF1P18846 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ATF1P18846 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
ATF1P18846 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.63■□□□□ 0.41
ATF1P18846 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.63■□□□□ 0.41
ATF1P18846 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms