Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCK1P16333 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NCK1P16333 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCK1P16333 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCK1P16333 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
NCK1P16333 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NCK1P16333 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
NCK1P16333 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.02■□□□□ 0.64
NCK1P16333 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NCK1P16333 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.02■□□□□ 0.64
NCK1P16333 AP001330.3-201ENST00000520123 633 ntBASIC19.02■□□□□ 0.64
NCK1P16333 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
NCK1P16333 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.02■□□□□ 0.64
NCK1P16333 AC012414.1-201ENST00000556676 535 ntBASIC19.02■□□□□ 0.64
NCK1P16333 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.02■□□□□ 0.64
NCK1P16333 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.02■□□□□ 0.64
NCK1P16333 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NCK1P16333 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NCK1P16333 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.02■□□□□ 0.64
NCK1P16333 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
NCK1P16333 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.02■□□□□ 0.63
NCK1P16333 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NCK1P16333 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NCK1P16333 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.01■□□□□ 0.63
NCK1P16333 AC093484.2-201ENST00000580996 2166 ntBASIC19.01■□□□□ 0.63
NCK1P16333 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.01■□□□□ 0.63
NCK1P16333 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.01■□□□□ 0.63
NCK1P16333 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.01■□□□□ 0.63
NCK1P16333 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.01■□□□□ 0.63
NCK1P16333 PBX2P1-201ENST00000493219 1291 ntBASIC19.01■□□□□ 0.63
NCK1P16333 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.01■□□□□ 0.63
NCK1P16333 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.01■□□□□ 0.63
NCK1P16333 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NCK1P16333 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.01■□□□□ 0.63
NCK1P16333 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.01■□□□□ 0.63
NCK1P16333 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCK1P16333 KRT16P2-201ENST00000414673 1423 ntBASIC19■□□□□ 0.63
NCK1P16333 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 TMEM179-206ENST00000616017 1645 ntBASIC19■□□□□ 0.63
NCK1P16333 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19■□□□□ 0.63
NCK1P16333 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NCK1P16333 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19■□□□□ 0.63
NCK1P16333 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19■□□□□ 0.63
NCK1P16333 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19■□□□□ 0.63
NCK1P16333 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19■□□□□ 0.63
NCK1P16333 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19■□□□□ 0.63
NCK1P16333 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NCK1P16333 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCK1P16333 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19■□□□□ 0.63
NCK1P16333 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.99■□□□□ 0.63
NCK1P16333 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.99■□□□□ 0.63
NCK1P16333 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 KRT87P-202ENST00000534226 1464 ntBASIC18.99■□□□□ 0.63
NCK1P16333 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.99■□□□□ 0.63
NCK1P16333 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NCK1P16333 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 AC079140.4-201ENST00000507448 529 ntBASIC18.99■□□□□ 0.63
NCK1P16333 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.99■□□□□ 0.63
NCK1P16333 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.99■□□□□ 0.63
NCK1P16333 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.99■□□□□ 0.63
NCK1P16333 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.99■□□□□ 0.63
NCK1P16333 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.99■□□□□ 0.63
NCK1P16333 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms