Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
COL6A2P12110 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL6A2P12110 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.92■□□□□ 0.78
COL6A2P12110 AL356652.1-201ENST00000615962 565 ntBASIC19.92■□□□□ 0.78
COL6A2P12110 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL6A2P12110 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL6A2P12110 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.92■□□□□ 0.78
COL6A2P12110 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A2P12110 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COL6A2P12110 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL6A2P12110 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.91■□□□□ 0.78
COL6A2P12110 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.91■□□□□ 0.78
COL6A2P12110 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL6A2P12110 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.91■□□□□ 0.78
COL6A2P12110 UBE2DNL-204ENST00000602536 740 ntBASIC19.91■□□□□ 0.78
COL6A2P12110 MYCNOS-205ENST00000641950 531 ntBASIC19.91■□□□□ 0.78
COL6A2P12110 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COL6A2P12110 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL6A2P12110 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL6A2P12110 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.91■□□□□ 0.78
COL6A2P12110 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.91■□□□□ 0.78
COL6A2P12110 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL6A2P12110 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A2P12110 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.9■□□□□ 0.78
COL6A2P12110 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A2P12110 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.9■□□□□ 0.78
COL6A2P12110 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A2P12110 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL6A2P12110 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.9■□□□□ 0.78
COL6A2P12110 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A2P12110 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.9■□□□□ 0.78
COL6A2P12110 AL591742.1-201ENST00000604433 565 ntBASIC19.9■□□□□ 0.78
COL6A2P12110 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.9■□□□□ 0.78
COL6A2P12110 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A2P12110 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A2P12110 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A2P12110 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.9■□□□□ 0.78
COL6A2P12110 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.89■□□□□ 0.77
COL6A2P12110 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.89■□□□□ 0.77
COL6A2P12110 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.89■□□□□ 0.77
COL6A2P12110 AL162412.1-201ENST00000567129 965 ntBASIC19.89■□□□□ 0.77
COL6A2P12110 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL6A2P12110 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.89■□□□□ 0.77
COL6A2P12110 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A2P12110 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
COL6A2P12110 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
COL6A2P12110 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
COL6A2P12110 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.88■□□□□ 0.77
COL6A2P12110 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.88■□□□□ 0.77
COL6A2P12110 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.88■□□□□ 0.77
COL6A2P12110 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms