Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RB1P06400 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RB1P06400 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.44■■□□□ 1.02
RB1P06400 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.44■■□□□ 1.02
RB1P06400 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
RB1P06400 AC242852.2-201ENST00000615738 1807 ntBASIC21.44■■□□□ 1.02
RB1P06400 TERF1P1-201ENST00000311003 1181 ntBASIC21.44■■□□□ 1.02
RB1P06400 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.44■■□□□ 1.02
RB1P06400 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.44■■□□□ 1.02
RB1P06400 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.44■■□□□ 1.02
RB1P06400 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RB1P06400 AC073508.3-201ENST00000619697 1419 ntBASIC21.44■■□□□ 1.02
RB1P06400 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RB1P06400 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RB1P06400 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RB1P06400 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.44■■□□□ 1.02
RB1P06400 AC027702.1-201ENST00000563810 1770 ntBASIC21.43■■□□□ 1.02
RB1P06400 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.43■■□□□ 1.02
RB1P06400 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 NIFKP9-201ENST00000419265 221 ntBASIC21.43■■□□□ 1.02
RB1P06400 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.43■■□□□ 1.02
RB1P06400 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.43■■□□□ 1.02
RB1P06400 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.43■■□□□ 1.02
RB1P06400 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.43■■□□□ 1.02
RB1P06400 AC010947.1-201ENST00000623454 693 ntBASIC21.43■■□□□ 1.02
RB1P06400 CR392000.1-201ENST00000624770 1228 ntBASIC21.43■■□□□ 1.02
RB1P06400 MIR2861-201ENST00000636310 90 ntBASIC21.43■■□□□ 1.02
RB1P06400 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 CYP2D8P-201ENST00000433633 1490 ntBASIC21.43■■□□□ 1.02
RB1P06400 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
RB1P06400 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RB1P06400 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RB1P06400 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RB1P06400 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.42■■□□□ 1.02
RB1P06400 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RB1P06400 KRT18P57-201ENST00000443599 1254 ntBASIC21.42■■□□□ 1.02
RB1P06400 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.42■■□□□ 1.02
RB1P06400 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.42■■□□□ 1.02
RB1P06400 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.42■■□□□ 1.02
RB1P06400 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.42■■□□□ 1.02
RB1P06400 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RB1P06400 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.42■■□□□ 1.02
RB1P06400 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.42■■□□□ 1.02
RB1P06400 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.42■■□□□ 1.02
RB1P06400 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 KRT16P1-201ENST00000399124 1418 ntBASIC21.41■■□□□ 1.02
RB1P06400 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.41■■□□□ 1.02
RB1P06400 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RB1P06400 C9orf163-202ENST00000624034 2573 ntBASIC21.41■■□□□ 1.02
RB1P06400 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 HLA-G-202ENST00000376815 851 ntBASIC21.41■■□□□ 1.02
RB1P06400 HLA-G-203ENST00000376818 1127 ntBASIC21.41■■□□□ 1.02
RB1P06400 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 SLC25A3P1-201ENST00000443844 931 ntBASIC21.41■■□□□ 1.02
RB1P06400 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.41■■□□□ 1.02
RB1P06400 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RB1P06400 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.41■■□□□ 1.02
RB1P06400 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.41■■□□□ 1.02
RB1P06400 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
RB1P06400 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RB1P06400 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RB1P06400 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.4■■□□□ 1.02
RB1P06400 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.4■■□□□ 1.02
RB1P06400 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RB1P06400 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
RB1P06400 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.4■■□□□ 1.02
RB1P06400 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RB1P06400 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.39■■□□□ 1.02
RB1P06400 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RB1P06400 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RB1P06400 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
RB1P06400 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms