Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGN1P05114 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HMGN1P05114 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
HMGN1P05114 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGN1P05114 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGN1P05114 AC007322.3-201ENST00000426526 701 ntBASIC18.23■□□□□ 0.51
HMGN1P05114 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGN1P05114 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGN1P05114 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGN1P05114 FAM21FP-204ENST00000608637 956 ntBASIC18.23■□□□□ 0.51
HMGN1P05114 AC243732.1-201ENST00000612648 864 ntBASIC18.23■□□□□ 0.51
HMGN1P05114 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HMGN1P05114 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGN1P05114 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGN1P05114 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HMGN1P05114 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HMGN1P05114 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 BX323043.1-201ENST00000641006 1765 ntBASIC18.22■□□□□ 0.51
HMGN1P05114 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
HMGN1P05114 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGN1P05114 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGN1P05114 AC104187.1-201ENST00000607510 612 ntBASIC18.22■□□□□ 0.51
HMGN1P05114 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 AC125437.2-201ENST00000625180 2167 ntBASIC18.22■□□□□ 0.51
HMGN1P05114 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGN1P05114 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGN1P05114 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGN1P05114 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HMGN1P05114 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 AC116562.4-201ENST00000641316 2276 ntBASIC18.21■□□□□ 0.51
HMGN1P05114 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HMGN1P05114 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 LINC02228-203ENST00000641970 1355 ntBASIC18.21■□□□□ 0.51
HMGN1P05114 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
HMGN1P05114 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
HMGN1P05114 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGN1P05114 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.21■□□□□ 0.51
HMGN1P05114 AC091799.1-201ENST00000422823 811 ntBASIC18.21■□□□□ 0.51
HMGN1P05114 AC105265.2-201ENST00000467189 838 ntBASIC18.21■□□□□ 0.51
HMGN1P05114 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGN1P05114 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGN1P05114 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGN1P05114 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HMGN1P05114 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HMGN1P05114 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.21■□□□□ 0.5
HMGN1P05114 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGN1P05114 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 AC027612.3-201ENST00000413684 1047 ntBASIC18.2■□□□□ 0.5
HMGN1P05114 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGN1P05114 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGN1P05114 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HMGN1P05114 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGN1P05114 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGN1P05114 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.2■□□□□ 0.5
HMGN1P05114 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGN1P05114 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGN1P05114 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGN1P05114 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGN1P05114 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGN1P05114 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HMGN1P05114 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGN1P05114 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGN1P05114 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HMGN1P05114 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HMGN1P05114 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGN1P05114 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGN1P05114 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGN1P05114 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGN1P05114 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.19■□□□□ 0.5
HMGN1P05114 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGN1P05114 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms