Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
GAPDHP04406 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.84■□□□□ 0.29
GAPDHP04406 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.84■□□□□ 0.29
GAPDHP04406 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.84■□□□□ 0.29
GAPDHP04406 AC016769.1-201ENST00000409132 1010 ntBASIC16.84■□□□□ 0.29
GAPDHP04406 AL162430.1-201ENST00000480705 870 ntBASIC16.84■□□□□ 0.29
GAPDHP04406 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.84■□□□□ 0.29
GAPDHP04406 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.84■□□□□ 0.29
GAPDHP04406 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.84■□□□□ 0.29
GAPDHP04406 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.84■□□□□ 0.29
GAPDHP04406 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
GAPDHP04406 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
GAPDHP04406 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
GAPDHP04406 TNXA-203ENST00000507684 2038 ntBASIC16.84■□□□□ 0.29
GAPDHP04406 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAPDHP04406 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
GAPDHP04406 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GAPDHP04406 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.83■□□□□ 0.28
GAPDHP04406 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.83■□□□□ 0.28
GAPDHP04406 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GAPDHP04406 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
GAPDHP04406 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.83■□□□□ 0.28
GAPDHP04406 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.83■□□□□ 0.28
GAPDHP04406 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GAPDHP04406 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GAPDHP04406 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GAPDHP04406 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.83■□□□□ 0.28
GAPDHP04406 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.82■□□□□ 0.28
GAPDHP04406 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GAPDHP04406 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.82■□□□□ 0.28
GAPDHP04406 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
GAPDHP04406 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GAPDHP04406 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.82■□□□□ 0.28
GAPDHP04406 UBE2DNL-204ENST00000602536 740 ntBASIC16.82■□□□□ 0.28
GAPDHP04406 MYCNOS-205ENST00000641950 531 ntBASIC16.82■□□□□ 0.28
GAPDHP04406 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.82■□□□□ 0.28
GAPDHP04406 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
GAPDHP04406 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.82■□□□□ 0.28
GAPDHP04406 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.82■□□□□ 0.28
GAPDHP04406 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
GAPDHP04406 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GAPDHP04406 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GAPDHP04406 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.81■□□□□ 0.28
GAPDHP04406 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.81■□□□□ 0.28
GAPDHP04406 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.81■□□□□ 0.28
GAPDHP04406 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.81■□□□□ 0.28
GAPDHP04406 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.81■□□□□ 0.28
GAPDHP04406 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.81■□□□□ 0.28
GAPDHP04406 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.81■□□□□ 0.28
GAPDHP04406 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.81■□□□□ 0.28
GAPDHP04406 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GAPDHP04406 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.81■□□□□ 0.28
GAPDHP04406 AC121338.2-201ENST00000622535 1744 ntBASIC16.81■□□□□ 0.28
GAPDHP04406 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.81■□□□□ 0.28
GAPDHP04406 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GAPDHP04406 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms