Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HLA-DRAP01903 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.71■■□□□ 1.07
HLA-DRAP01903 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 AC069152.1-201ENST00000438030 544 ntBASIC21.71■■□□□ 1.07
HLA-DRAP01903 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.71■■□□□ 1.07
HLA-DRAP01903 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.71■■□□□ 1.07
HLA-DRAP01903 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
HLA-DRAP01903 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HLA-DRAP01903 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.71■■□□□ 1.07
HLA-DRAP01903 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRAP01903 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
HLA-DRAP01903 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 AC073210.2-201ENST00000430369 194 ntBASIC21.7■■□□□ 1.06
HLA-DRAP01903 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRAP01903 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DRAP01903 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
HLA-DRAP01903 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.69■■□□□ 1.06
HLA-DRAP01903 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.69■■□□□ 1.06
HLA-DRAP01903 AC133041.1-202ENST00000642053 222 ntBASIC21.69■■□□□ 1.06
HLA-DRAP01903 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DRAP01903 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.69■■□□□ 1.06
HLA-DRAP01903 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HLA-DRAP01903 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRAP01903 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 AC097658.1-201ENST00000475555 843 ntBASIC21.68■■□□□ 1.06
HLA-DRAP01903 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 AC083880.1-201ENST00000608266 535 ntBASIC21.68■■□□□ 1.06
HLA-DRAP01903 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRAP01903 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.68■■□□□ 1.06
HLA-DRAP01903 AL391422.3-201ENST00000603791 2761 ntBASIC21.68■■□□□ 1.06
HLA-DRAP01903 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms