Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.44■□□□□ 0.86
PDGFBP01127 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.44■□□□□ 0.86
PDGFBP01127 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFBP01127 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFBP01127 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFBP01127 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFBP01127 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDGFBP01127 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.43■□□□□ 0.86
PDGFBP01127 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PDGFBP01127 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDGFBP01127 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PDGFBP01127 MESTP1-201ENST00000404287 994 ntBASIC20.43■□□□□ 0.86
PDGFBP01127 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.43■□□□□ 0.86
PDGFBP01127 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDGFBP01127 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
PDGFBP01127 EGLN1P1-201ENST00000531623 762 ntBASIC20.43■□□□□ 0.86
PDGFBP01127 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFBP01127 FAM87A-204ENST00000613235 858 ntBASIC20.43■□□□□ 0.86
PDGFBP01127 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.43■□□□□ 0.86
PDGFBP01127 AP000550.4-202ENST00000639755 178 ntBASIC20.43■□□□□ 0.86
PDGFBP01127 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFBP01127 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFBP01127 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 TSPY14P-201ENST00000303979 915 ntBASIC20.42■□□□□ 0.86
PDGFBP01127 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.42■□□□□ 0.86
PDGFBP01127 AL450487.1-201ENST00000426799 995 ntBASIC20.42■□□□□ 0.86
PDGFBP01127 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.42■□□□□ 0.86
PDGFBP01127 AC091390.4-202ENST00000476426 537 ntBASIC20.42■□□□□ 0.86
PDGFBP01127 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.42■□□□□ 0.86
PDGFBP01127 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.42■□□□□ 0.86
PDGFBP01127 AC139887.4-201ENST00000607877 719 ntBASIC20.42■□□□□ 0.86
PDGFBP01127 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.42■□□□□ 0.86
PDGFBP01127 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
PDGFBP01127 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.42■□□□□ 0.86
PDGFBP01127 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFBP01127 FAM8A6P-201ENST00000407496 1135 ntBASIC20.41■□□□□ 0.86
PDGFBP01127 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
PDGFBP01127 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.41■□□□□ 0.86
PDGFBP01127 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFBP01127 AC023632.3-201ENST00000521633 145 ntBASIC20.41■□□□□ 0.86
PDGFBP01127 AC093458.2-201ENST00000623150 629 ntBASIC20.41■□□□□ 0.86
PDGFBP01127 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFBP01127 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFBP01127 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFBP01127 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFBP01127 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFBP01127 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFBP01127 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PDGFBP01127 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFBP01127 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFBP01127 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFBP01127 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFBP01127 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFBP01127 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFBP01127 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFBP01127 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.4■□□□□ 0.86
PDGFBP01127 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDGFBP01127 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.4■□□□□ 0.86
PDGFBP01127 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFBP01127 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.4■□□□□ 0.86
PDGFBP01127 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFBP01127 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFBP01127 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.4■□□□□ 0.86
PDGFBP01127 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDGFBP01127 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDGFBP01127 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.39■□□□□ 0.85
PDGFBP01127 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.39■□□□□ 0.85
PDGFBP01127 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.39■□□□□ 0.85
PDGFBP01127 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.39■□□□□ 0.85
PDGFBP01127 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.39■□□□□ 0.85
PDGFBP01127 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.39■□□□□ 0.85
PDGFBP01127 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.39■□□□□ 0.85
PDGFBP01127 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PDGFBP01127 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PDGFBP01127 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDGFBP01127 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.38■□□□□ 0.85
PDGFBP01127 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms