Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 OR2I1P-207ENST00000453522 948 ntBASIC16.86■□□□□ 0.29
SIX6O95475 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.86■□□□□ 0.29
SIX6O95475 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 AC010525.1-201ENST00000585559 441 ntBASIC16.86■□□□□ 0.29
SIX6O95475 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SIX6O95475 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX6O95475 TREX1-205ENST00000625293 1783 ntBASIC16.85■□□□□ 0.29
SIX6O95475 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 ATP5G2P3-201ENST00000429083 425 ntBASIC16.85■□□□□ 0.29
SIX6O95475 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.85■□□□□ 0.29
SIX6O95475 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX6O95475 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
SIX6O95475 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX6O95475 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.85■□□□□ 0.29
SIX6O95475 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX6O95475 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX6O95475 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SIX6O95475 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SIX6O95475 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.84■□□□□ 0.29
SIX6O95475 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.84■□□□□ 0.29
SIX6O95475 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SIX6O95475 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.84■□□□□ 0.29
SIX6O95475 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.84■□□□□ 0.29
SIX6O95475 KRT8P33-201ENST00000508125 1423 ntBASIC16.84■□□□□ 0.29
SIX6O95475 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.84■□□□□ 0.29
SIX6O95475 AL691432.2-201ENST00000607222 2038 ntBASIC16.84■□□□□ 0.29
SIX6O95475 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SIX6O95475 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX6O95475 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SIX6O95475 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
SIX6O95475 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SIX6O95475 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.83■□□□□ 0.29
SIX6O95475 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SIX6O95475 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.83■□□□□ 0.28
SIX6O95475 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SIX6O95475 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.83■□□□□ 0.28
SIX6O95475 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.83■□□□□ 0.28
SIX6O95475 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.83■□□□□ 0.28
SIX6O95475 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SIX6O95475 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SIX6O95475 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIX6O95475 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SIX6O95475 TMEM179-206ENST00000616017 1645 ntBASIC16.83■□□□□ 0.28
SIX6O95475 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.83■□□□□ 0.28
SIX6O95475 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SIX6O95475 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX6O95475 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX6O95475 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX6O95475 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms