Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG5O95196 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG5O95196 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
CSPG5O95196 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
CSPG5O95196 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.69■■□□□ 1.06
CSPG5O95196 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.69■■□□□ 1.06
CSPG5O95196 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CSPG5O95196 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG5O95196 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.69■■□□□ 1.06
CSPG5O95196 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CSPG5O95196 AP003071.4-201ENST00000562276 1284 ntBASIC21.68■■□□□ 1.06
CSPG5O95196 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG5O95196 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CSPG5O95196 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 KRT18P35-201ENST00000510488 1269 ntBASIC21.67■■□□□ 1.06
CSPG5O95196 RARRES2P10-201ENST00000564312 460 ntBASIC21.67■■□□□ 1.06
CSPG5O95196 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.67■■□□□ 1.06
CSPG5O95196 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.67■■□□□ 1.06
CSPG5O95196 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG5O95196 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.67■■□□□ 1.06
CSPG5O95196 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CSPG5O95196 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.66■■□□□ 1.06
CSPG5O95196 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 ARMC10P1-201ENST00000313754 855 ntBASIC21.66■■□□□ 1.06
CSPG5O95196 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CSPG5O95196 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.66■■□□□ 1.06
CSPG5O95196 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.66■■□□□ 1.06
CSPG5O95196 AL355355.2-201ENST00000442321 338 ntBASIC21.66■■□□□ 1.06
CSPG5O95196 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.66■■□□□ 1.06
CSPG5O95196 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CSPG5O95196 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.66■■□□□ 1.06
CSPG5O95196 AL353708.3-201ENST00000610272 989 ntBASIC21.66■■□□□ 1.06
CSPG5O95196 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CSPG5O95196 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CSPG5O95196 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG5O95196 PKD1P6-201ENST00000343738 4769 ntBASIC21.66■■□□□ 1.06
CSPG5O95196 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CSPG5O95196 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 FAM197Y1-201ENST00000421178 764 ntBASIC21.65■■□□□ 1.06
CSPG5O95196 PGM5P4-201ENST00000421970 445 ntBASIC21.65■■□□□ 1.06
CSPG5O95196 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.65■■□□□ 1.06
CSPG5O95196 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 AC097493.4-201ENST00000641197 219 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms