Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT33AO76009 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT33AO76009 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT33AO76009 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT33AO76009 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
KRT33AO76009 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.25■□□□□ 0.51
KRT33AO76009 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT33AO76009 GABARAPL3-202ENST00000624044 1851 ntBASIC18.24■□□□□ 0.51
KRT33AO76009 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT33AO76009 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT33AO76009 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KRT33AO76009 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KRT33AO76009 CNN2P6-201ENST00000439038 900 ntBASIC18.24■□□□□ 0.51
KRT33AO76009 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KRT33AO76009 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT33AO76009 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT33AO76009 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KRT33AO76009 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT33AO76009 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT33AO76009 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.23■□□□□ 0.51
KRT33AO76009 MIR663A-201ENST00000385250 93 ntBASIC18.23■□□□□ 0.51
KRT33AO76009 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.23■□□□□ 0.51
KRT33AO76009 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
KRT33AO76009 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 AC068338.2-201ENST00000563278 1430 ntBASIC18.23■□□□□ 0.51
KRT33AO76009 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT33AO76009 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KRT33AO76009 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
KRT33AO76009 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.22■□□□□ 0.51
KRT33AO76009 AL162412.1-201ENST00000567129 965 ntBASIC18.22■□□□□ 0.51
KRT33AO76009 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 AC011484.1-201ENST00000377652 1995 ntBASIC18.22■□□□□ 0.51
KRT33AO76009 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT33AO76009 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT33AO76009 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KRT33AO76009 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT33AO76009 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT33AO76009 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT33AO76009 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT33AO76009 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT33AO76009 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT33AO76009 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT33AO76009 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT33AO76009 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT33AO76009 CYP2T1P-201ENST00000432607 1285 ntBASIC18.21■□□□□ 0.51
KRT33AO76009 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT33AO76009 AC090192.1-201ENST00000517740 490 ntBASIC18.21■□□□□ 0.51
KRT33AO76009 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT33AO76009 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT33AO76009 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT33AO76009 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
KRT33AO76009 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT33AO76009 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT33AO76009 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
KRT33AO76009 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT33AO76009 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT33AO76009 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT33AO76009 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT33AO76009 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT33AO76009 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms