Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ZNF253O75346 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF253O75346 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 FP700111.2-201ENST00000619190 1892 ntBASIC15.65■□□□□ 0.1
ZNF253O75346 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF253O75346 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF253O75346 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF253O75346 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF253O75346 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF253O75346 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF253O75346 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 AP001330.3-201ENST00000520123 633 ntBASIC15.65■□□□□ 0.1
ZNF253O75346 AC106739.1-201ENST00000617035 715 ntBASIC15.65■□□□□ 0.1
ZNF253O75346 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF253O75346 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
ZNF253O75346 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF253O75346 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ZNF253O75346 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ZNF253O75346 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF253O75346 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF253O75346 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ZNF253O75346 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ZNF253O75346 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ZNF253O75346 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF253O75346 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF253O75346 AC091305.1-201ENST00000479476 895 ntBASIC15.64■□□□□ 0.09
ZNF253O75346 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF253O75346 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF253O75346 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
ZNF253O75346 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF253O75346 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF253O75346 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF253O75346 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ZNF253O75346 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF253O75346 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF253O75346 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF253O75346 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF253O75346 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF253O75346 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
ZNF253O75346 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 PBX2P1-201ENST00000493219 1291 ntBASIC15.63■□□□□ 0.09
ZNF253O75346 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF253O75346 AL354811.1-201ENST00000610286 706 ntBASIC15.63■□□□□ 0.09
ZNF253O75346 AL355001.2-201ENST00000620617 1191 ntBASIC15.63■□□□□ 0.09
ZNF253O75346 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ZNF253O75346 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF253O75346 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF253O75346 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF253O75346 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF253O75346 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF253O75346 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF253O75346 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF253O75346 AC061975.6-201ENST00000579045 1553 ntBASIC15.62■□□□□ 0.09
ZNF253O75346 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF253O75346 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF253O75346 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF253O75346 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms