Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 LINC01521-201ENST00000504184 1943 ntBASIC19.31■□□□□ 0.68
LCMT2O60294 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LCMT2O60294 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.31■□□□□ 0.68
LCMT2O60294 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.31■□□□□ 0.68
LCMT2O60294 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.31■□□□□ 0.68
LCMT2O60294 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.31■□□□□ 0.68
LCMT2O60294 AC083880.1-201ENST00000608266 535 ntBASIC19.31■□□□□ 0.68
LCMT2O60294 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LCMT2O60294 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.31■□□□□ 0.68
LCMT2O60294 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCMT2O60294 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCMT2O60294 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LCMT2O60294 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCMT2O60294 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCMT2O60294 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.3■□□□□ 0.68
LCMT2O60294 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
LCMT2O60294 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LCMT2O60294 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCMT2O60294 PTBP1P-201ENST00000554374 1601 ntBASIC19.3■□□□□ 0.68
LCMT2O60294 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCMT2O60294 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCMT2O60294 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCMT2O60294 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LCMT2O60294 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.3■□□□□ 0.68
LCMT2O60294 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LCMT2O60294 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
LCMT2O60294 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.3■□□□□ 0.68
LCMT2O60294 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LCMT2O60294 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LCMT2O60294 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LCMT2O60294 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.29■□□□□ 0.68
LCMT2O60294 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.29■□□□□ 0.68
LCMT2O60294 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.29■□□□□ 0.68
LCMT2O60294 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.29■□□□□ 0.68
LCMT2O60294 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 AL391422.3-201ENST00000603791 2761 ntBASIC19.29■□□□□ 0.68
LCMT2O60294 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.29■□□□□ 0.68
LCMT2O60294 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCMT2O60294 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
LCMT2O60294 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.28■□□□□ 0.68
LCMT2O60294 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
LCMT2O60294 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.28■□□□□ 0.68
LCMT2O60294 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.28■□□□□ 0.68
LCMT2O60294 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LCMT2O60294 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
LCMT2O60294 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.28■□□□□ 0.68
LCMT2O60294 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.28■□□□□ 0.68
LCMT2O60294 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LCMT2O60294 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.28■□□□□ 0.68
LCMT2O60294 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCMT2O60294 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LCMT2O60294 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LCMT2O60294 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.27■□□□□ 0.68
LCMT2O60294 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.27■□□□□ 0.68
LCMT2O60294 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms