Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PEX1O43933 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PEX1O43933 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.58■□□□□ 0.73
PEX1O43933 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PEX1O43933 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PEX1O43933 AC055733.4-201ENST00000638462 1354 ntBASIC19.58■□□□□ 0.73
PEX1O43933 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.58■□□□□ 0.73
PEX1O43933 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PEX1O43933 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
PEX1O43933 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
PEX1O43933 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.58■□□□□ 0.73
PEX1O43933 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.58■□□□□ 0.72
PEX1O43933 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.58■□□□□ 0.72
PEX1O43933 AL034346.1-201ENST00000568244 1277 ntBASIC19.58■□□□□ 0.72
PEX1O43933 AC121338.2-201ENST00000622535 1744 ntBASIC19.58■□□□□ 0.72
PEX1O43933 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PEX1O43933 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PEX1O43933 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PEX1O43933 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PEX1O43933 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PEX1O43933 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.58■□□□□ 0.72
PEX1O43933 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PEX1O43933 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PEX1O43933 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.58■□□□□ 0.72
PEX1O43933 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PEX1O43933 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PEX1O43933 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PEX1O43933 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.57■□□□□ 0.72
PEX1O43933 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.57■□□□□ 0.72
PEX1O43933 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.57■□□□□ 0.72
PEX1O43933 AC104187.1-201ENST00000607510 612 ntBASIC19.57■□□□□ 0.72
PEX1O43933 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 BID-214ENST00000617586 542 ntTSL 5 BASIC19.57■□□□□ 0.72
PEX1O43933 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PEX1O43933 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PEX1O43933 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PEX1O43933 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PEX1O43933 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.56■□□□□ 0.72
PEX1O43933 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.56■□□□□ 0.72
PEX1O43933 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.56■□□□□ 0.72
PEX1O43933 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PEX1O43933 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.56■□□□□ 0.72
PEX1O43933 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.56■□□□□ 0.72
PEX1O43933 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PEX1O43933 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.56■□□□□ 0.72
PEX1O43933 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PEX1O43933 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PEX1O43933 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PEX1O43933 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX1O43933 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.56■□□□□ 0.72
PEX1O43933 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PEX1O43933 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PEX1O43933 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
PEX1O43933 KRT18P11-201ENST00000435214 1283 ntBASIC19.55■□□□□ 0.72
PEX1O43933 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.55■□□□□ 0.72
PEX1O43933 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.55■□□□□ 0.72
PEX1O43933 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PEX1O43933 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.55■□□□□ 0.72
PEX1O43933 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.55■□□□□ 0.72
PEX1O43933 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.55■□□□□ 0.72
PEX1O43933 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX1O43933 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms