Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
IDH3BO43837 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.43■□□□□ 0.54
IDH3BO43837 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
IDH3BO43837 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.43■□□□□ 0.54
IDH3BO43837 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.43■□□□□ 0.54
IDH3BO43837 AC005837.3-201ENST00000612163 286 ntBASIC18.43■□□□□ 0.54
IDH3BO43837 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
IDH3BO43837 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
IDH3BO43837 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
IDH3BO43837 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.43■□□□□ 0.54
IDH3BO43837 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.43■□□□□ 0.54
IDH3BO43837 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.43■□□□□ 0.54
IDH3BO43837 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
IDH3BO43837 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
IDH3BO43837 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.42■□□□□ 0.54
IDH3BO43837 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.42■□□□□ 0.54
IDH3BO43837 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.42■□□□□ 0.54
IDH3BO43837 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
IDH3BO43837 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
IDH3BO43837 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4L2-201ENST00000561772 1275 ntBASIC18.42■□□□□ 0.54
IDH3BO43837 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4L6-201ENST00000626483 1275 ntBASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4L1-201ENST00000627662 1275 ntBASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4L8-201ENST00000629013 1275 ntBASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4L3-201ENST00000630187 1275 ntBASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4L7-201ENST00000630678 1275 ntBASIC18.42■□□□□ 0.54
IDH3BO43837 DUX4L5-201ENST00000630834 1275 ntBASIC18.42■□□□□ 0.54
IDH3BO43837 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.42■□□□□ 0.54
IDH3BO43837 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.42■□□□□ 0.54
IDH3BO43837 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.42■□□□□ 0.54
IDH3BO43837 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IDH3BO43837 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
IDH3BO43837 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.41■□□□□ 0.54
IDH3BO43837 AC092720.2-201ENST00000602388 1665 ntBASIC18.41■□□□□ 0.54
IDH3BO43837 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.41■□□□□ 0.54
IDH3BO43837 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.41■□□□□ 0.54
IDH3BO43837 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.41■□□□□ 0.54
IDH3BO43837 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.41■□□□□ 0.54
IDH3BO43837 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.41■□□□□ 0.54
IDH3BO43837 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.41■□□□□ 0.54
IDH3BO43837 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
IDH3BO43837 SMG8-203ENST00000578922 2178 ntBASIC18.41■□□□□ 0.54
IDH3BO43837 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IDH3BO43837 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.4■□□□□ 0.54
IDH3BO43837 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IDH3BO43837 AC098818.2-201ENST00000564925 2320 ntBASIC18.4■□□□□ 0.54
IDH3BO43837 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IDH3BO43837 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
IDH3BO43837 AC116050.2-201ENST00000612102 1779 ntBASIC18.4■□□□□ 0.54
IDH3BO43837 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IDH3BO43837 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IDH3BO43837 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IDH3BO43837 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IDH3BO43837 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
IDH3BO43837 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.4■□□□□ 0.54
IDH3BO43837 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.4■□□□□ 0.54
IDH3BO43837 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IDH3BO43837 AC123595.1-201ENST00000440769 1046 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms