Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLIC1O00299 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC1O00299 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19■□□□□ 0.63
CLIC1O00299 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC1O00299 AL158211.5-201ENST00000623583 2518 ntBASIC19■□□□□ 0.63
CLIC1O00299 KRT19P1-201ENST00000405746 1186 ntBASIC19■□□□□ 0.63
CLIC1O00299 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19■□□□□ 0.63
CLIC1O00299 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLIC1O00299 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19■□□□□ 0.63
CLIC1O00299 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19■□□□□ 0.63
CLIC1O00299 H19-201ENST00000411754 1788 ntTSL 5 BASIC19■□□□□ 0.63
CLIC1O00299 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19■□□□□ 0.63
CLIC1O00299 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19■□□□□ 0.63
CLIC1O00299 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLIC1O00299 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIC1O00299 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC1O00299 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC1O00299 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC1O00299 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CLIC1O00299 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CLIC1O00299 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLIC1O00299 BX119927.1-201ENST00000636596 1552 ntBASIC18.99■□□□□ 0.63
CLIC1O00299 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIC1O00299 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIC1O00299 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIC1O00299 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CLIC1O00299 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC1O00299 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLIC1O00299 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC1O00299 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLIC1O00299 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC1O00299 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC1O00299 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC1O00299 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CLIC1O00299 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLIC1O00299 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC1O00299 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC1O00299 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC1O00299 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLIC1O00299 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC1O00299 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.98■□□□□ 0.63
CLIC1O00299 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC1O00299 AC116562.4-201ENST00000641316 2276 ntBASIC18.98■□□□□ 0.63
CLIC1O00299 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLIC1O00299 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CLIC1O00299 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC1O00299 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.97■□□□□ 0.63
CLIC1O00299 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC1O00299 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.97■□□□□ 0.63
CLIC1O00299 TMEM179-206ENST00000616017 1645 ntBASIC18.97■□□□□ 0.63
CLIC1O00299 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLIC1O00299 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CLIC1O00299 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.97■□□□□ 0.63
CLIC1O00299 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC1O00299 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CLIC1O00299 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CLIC1O00299 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC1O00299 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLIC1O00299 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC1O00299 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLIC1O00299 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.96■□□□□ 0.63
CLIC1O00299 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CLIC1O00299 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.96■□□□□ 0.63
CLIC1O00299 AC097381.1-201ENST00000429019 1296 ntBASIC18.96■□□□□ 0.63
CLIC1O00299 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.96■□□□□ 0.63
CLIC1O00299 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms