Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AC084018.2-201ENST00000613093 2607 ntBASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.64■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PCDHA12-202ENST00000613593 2588 ntBASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 AL391005.1-201ENST00000623953 2435 ntBASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 AC090340.1-201ENST00000620778 4980 ntBASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BOLA2-SMG1P6H3BVE0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms