Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 RPPH1-201ENST00000516869 333 ntBASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.77■□□□□ 0.75
TMX2-CTNND1H3BSU7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TMX2-CTNND1H3BSU7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TMX2-CTNND1H3BSU7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 C1QBPP2-201ENST00000528754 825 ntBASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 RN7SL471P-201ENST00000580476 299 ntBASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TMX2-CTNND1H3BSU7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TMX2-CTNND1H3BSU7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 CYP21A1P-202ENST00000354927 1481 ntBASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC105020.6-201ENST00000621523 1217 ntBASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.74■□□□□ 0.75
TMX2-CTNND1H3BSU7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC116050.2-201ENST00000612102 1779 ntBASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 PGM5P4-201ENST00000421970 445 ntBASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 SOX15-203ENST00000570788 1093 ntBASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms