Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 AC004408.2-201ENST00000623613 2777 ntBASIC17.18■□□□□ 0.34
TMEM235A6NFC5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 AC116050.2-201ENST00000612102 1779 ntBASIC17.18■□□□□ 0.34
TMEM235A6NFC5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 AC005332.7-201ENST00000614046 2005 ntBASIC17.18■□□□□ 0.34
TMEM235A6NFC5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM235A6NFC5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 DPP3P2-201ENST00000416030 1696 ntBASIC17.17■□□□□ 0.34
TMEM235A6NFC5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 TMEM179-206ENST00000616017 1645 ntBASIC17.17■□□□□ 0.34
TMEM235A6NFC5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM235A6NFC5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 KRT16P2-201ENST00000414673 1423 ntBASIC17.16■□□□□ 0.34
TMEM235A6NFC5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
TMEM235A6NFC5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms