Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RCCD1A6NED2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RCCD1A6NED2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RCCD1A6NED2 AC004854.2-201ENST00000608450 1441 ntBASIC21.46■■□□□ 1.03
RCCD1A6NED2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RCCD1A6NED2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RCCD1A6NED2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RCCD1A6NED2 KRT18P20-201ENST00000548986 1279 ntBASIC21.46■■□□□ 1.03
RCCD1A6NED2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RCCD1A6NED2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RCCD1A6NED2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.46■■□□□ 1.03
RCCD1A6NED2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RCCD1A6NED2 AC019069.1-201ENST00000610008 1333 ntBASIC21.46■■□□□ 1.03
RCCD1A6NED2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RCCD1A6NED2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.45■■□□□ 1.03
RCCD1A6NED2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 KRT18P61-201ENST00000585825 1298 ntBASIC21.45■■□□□ 1.02
RCCD1A6NED2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
RCCD1A6NED2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RCCD1A6NED2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCCD1A6NED2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
RCCD1A6NED2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCCD1A6NED2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RCCD1A6NED2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCCD1A6NED2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCCD1A6NED2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCCD1A6NED2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.44■■□□□ 1.02
RCCD1A6NED2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.44■■□□□ 1.02
RCCD1A6NED2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.44■■□□□ 1.02
RCCD1A6NED2 AC005837.3-201ENST00000612163 286 ntBASIC21.44■■□□□ 1.02
RCCD1A6NED2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCCD1A6NED2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RCCD1A6NED2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RCCD1A6NED2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCCD1A6NED2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RCCD1A6NED2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RCCD1A6NED2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RCCD1A6NED2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RCCD1A6NED2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.43■■□□□ 1.02
RCCD1A6NED2 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.43■■□□□ 1.02
RCCD1A6NED2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.43■■□□□ 1.02
RCCD1A6NED2 SLC7A5P1-201ENST00000568957 537 ntBASIC21.43■■□□□ 1.02
RCCD1A6NED2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RCCD1A6NED2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RCCD1A6NED2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.43■■□□□ 1.02
RCCD1A6NED2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.43■■□□□ 1.02
RCCD1A6NED2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.43■■□□□ 1.02
RCCD1A6NED2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.43■■□□□ 1.02
RCCD1A6NED2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RCCD1A6NED2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RCCD1A6NED2 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RCCD1A6NED2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RCCD1A6NED2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RCCD1A6NED2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RCCD1A6NED2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RCCD1A6NED2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.42■■□□□ 1.02
RCCD1A6NED2 TNXA-203ENST00000507684 2038 ntBASIC21.41■■□□□ 1.02
RCCD1A6NED2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.41■■□□□ 1.02
RCCD1A6NED2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.41■■□□□ 1.02
RCCD1A6NED2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 AC004408.2-201ENST00000623613 2777 ntBASIC21.41■■□□□ 1.02
RCCD1A6NED2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.41■■□□□ 1.02
RCCD1A6NED2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.41■■□□□ 1.02
RCCD1A6NED2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.41■■□□□ 1.02
RCCD1A6NED2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
RCCD1A6NED2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.41■■□□□ 1.02
RCCD1A6NED2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCCD1A6NED2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms