Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC30■■■□□ 2.39
HFM1A2PYH4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
HFM1A2PYH4 AC124283.5-201ENST00000624661 1809 ntBASIC30■■■□□ 2.39
HFM1A2PYH4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HFM1A2PYH4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
HFM1A2PYH4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
HFM1A2PYH4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
HFM1A2PYH4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HFM1A2PYH4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HFM1A2PYH4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
HFM1A2PYH4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HFM1A2PYH4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC29.98■■■□□ 2.39
HFM1A2PYH4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HFM1A2PYH4 RN7SL471P-201ENST00000580476 299 ntBASIC29.98■■■□□ 2.39
HFM1A2PYH4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HFM1A2PYH4 KRT8P20-201ENST00000423953 1409 ntBASIC29.98■■■□□ 2.39
HFM1A2PYH4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HFM1A2PYH4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
HFM1A2PYH4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC29.97■■■□□ 2.39
HFM1A2PYH4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC29.97■■■□□ 2.39
HFM1A2PYH4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC29.97■■■□□ 2.39
HFM1A2PYH4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC29.97■■■□□ 2.39
HFM1A2PYH4 CLDN5-201ENST00000403084 2357 ntBASIC29.97■■■□□ 2.39
HFM1A2PYH4 AP005212.1-201ENST00000581547 1997 ntBASIC29.97■■■□□ 2.39
HFM1A2PYH4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
HFM1A2PYH4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
HFM1A2PYH4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC29.97■■■□□ 2.39
HFM1A2PYH4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
HFM1A2PYH4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
HFM1A2PYH4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC29.96■■■□□ 2.39
HFM1A2PYH4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
HFM1A2PYH4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC29.96■■■□□ 2.39
HFM1A2PYH4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.39
HFM1A2PYH4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC29.95■■■□□ 2.39
HFM1A2PYH4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
HFM1A2PYH4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
HFM1A2PYH4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
HFM1A2PYH4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC29.95■■■□□ 2.39
HFM1A2PYH4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
HFM1A2PYH4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
HFM1A2PYH4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC29.95■■■□□ 2.38
HFM1A2PYH4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC29.95■■■□□ 2.38
HFM1A2PYH4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC29.95■■■□□ 2.38
HFM1A2PYH4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC29.95■■■□□ 2.38
HFM1A2PYH4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
HFM1A2PYH4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
HFM1A2PYH4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC29.94■■■□□ 2.38
HFM1A2PYH4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HFM1A2PYH4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
HFM1A2PYH4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC29.94■■■□□ 2.38
HFM1A2PYH4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HFM1A2PYH4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HFM1A2PYH4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
HFM1A2PYH4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC29.94■■■□□ 2.38
HFM1A2PYH4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC29.94■■■□□ 2.38
HFM1A2PYH4 AC133681.1-201ENST00000465482 601 ntBASIC29.94■■■□□ 2.38
HFM1A2PYH4 MAX-217ENST00000557277 728 ntTSL 3 BASIC29.94■■■□□ 2.38
HFM1A2PYH4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC29.94■■■□□ 2.38
HFM1A2PYH4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC29.94■■■□□ 2.38
HFM1A2PYH4 AC073314.1-201ENST00000568729 2216 ntBASIC29.94■■■□□ 2.38
HFM1A2PYH4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
HFM1A2PYH4 KRT8P17-201ENST00000453110 1448 ntBASIC29.93■■■□□ 2.38
HFM1A2PYH4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
HFM1A2PYH4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
HFM1A2PYH4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
HFM1A2PYH4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
HFM1A2PYH4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
HFM1A2PYH4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
HFM1A2PYH4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
HFM1A2PYH4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC29.93■■■□□ 2.38
HFM1A2PYH4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC29.93■■■□□ 2.38
HFM1A2PYH4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
HFM1A2PYH4 RPPH1-201ENST00000516869 333 ntBASIC29.93■■■□□ 2.38
HFM1A2PYH4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC29.93■■■□□ 2.38
HFM1A2PYH4 AC124016.1-201ENST00000609552 612 ntBASIC29.93■■■□□ 2.38
HFM1A2PYH4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
HFM1A2PYH4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
HFM1A2PYH4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
HFM1A2PYH4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
HFM1A2PYH4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
HFM1A2PYH4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
HFM1A2PYH4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
HFM1A2PYH4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
HFM1A2PYH4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms