Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM129A0AVI4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM129A0AVI4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM129A0AVI4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM129A0AVI4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM129A0AVI4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM129A0AVI4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM129A0AVI4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
TMEM129A0AVI4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 AL158211.5-201ENST00000623583 2518 ntBASIC18.2■□□□□ 0.5
TMEM129A0AVI4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.2■□□□□ 0.5
TMEM129A0AVI4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM129A0AVI4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 EEF1DP3-203ENST00000566025 782 ntBASIC18.19■□□□□ 0.5
TMEM129A0AVI4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 AP001160.3-201ENST00000601484 763 ntBASIC18.19■□□□□ 0.5
TMEM129A0AVI4 AC080038.1-201ENST00000611274 1154 ntBASIC18.19■□□□□ 0.5
TMEM129A0AVI4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM129A0AVI4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.18■□□□□ 0.5
TMEM129A0AVI4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 AC138907.5-202ENST00000569484 235 ntBASIC18.18■□□□□ 0.5
TMEM129A0AVI4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM129A0AVI4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM129A0AVI4 AC053503.5-201ENST00000601508 636 ntBASIC18.17■□□□□ 0.5
TMEM129A0AVI4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms