Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 SMG8-203ENST00000578922 2178 ntBASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC068338.2-201ENST00000563278 1430 ntBASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 AIRN-201ENST00000601203 4374 ntBASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 CNN2P6-201ENST00000439038 900 ntBASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-4A0A1B0GX49 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC007322.1-201ENST00000426983 750 ntBASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-4A0A1B0GX49 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-4A0A1B0GX49 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms