Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC026471.1-201ENST00000564629 3026 ntBASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 KRT18P5-201ENST00000436075 1291 ntBASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 AC007322.4-201ENST00000509611 723 ntBASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 AL162412.1-201ENST00000567129 965 ntBASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 RARRES2P6-201ENST00000567333 442 ntBASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV4A0A0B4J268 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 KRT8P36-201ENST00000489121 1440 ntBASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV4A0A0B4J268 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms