Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 GPX4-205ENST00000587932 274 ntTSL 224.09■■□□□ 1.456e-8■■□□□ 12.8
PRPF8Q6P2Q9 COQ8A-209ENST00000489044 941 ntTSL 315.72■□□□□ 0.114e-8■■□□□ 12.7
PRPF8Q6P2Q9 GMPR2-221ENST00000559606 732 ntTSL 55.75□□□□□ -1.491e-7■■□□□ 12.7
PRPF8Q6P2Q9 TPI1-205ENST00000482209 328 ntTSL 28.6□□□□□ -1.035e-8■■□□□ 12.7
PRPF8Q6P2Q9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.485e-8■■□□□ 12.7
PRPF8Q6P2Q9 STK11-204ENST00000585851 505 ntTSL 311.88□□□□□ -0.511e-6■■□□□ 12.7
PRPF8Q6P2Q9 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC10.53□□□□□ -0.725e-8■■□□□ 12.7
PRPF8Q6P2Q9 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC9.95□□□□□ -0.825e-8■■□□□ 12.7
PRPF8Q6P2Q9 SNRPD2-204ENST00000587367 596 ntTSL 3 BASIC9.39□□□□□ -0.915e-8■■□□□ 12.7
PRPF8Q6P2Q9 SNRPD2-202ENST00000391932 615 ntTSL 2 BASIC9.15□□□□□ -0.945e-8■■□□□ 12.7
PRPF8Q6P2Q9 SNRPD2-208ENST00000590212 454 ntTSL 3 BASIC8.85□□□□□ -0.995e-8■■□□□ 12.7
PRPF8Q6P2Q9 SNRPD2-201ENST00000342669 901 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -15e-8■■□□□ 12.7
PRPF8Q6P2Q9 ZFX-210ENST00000497813 475 ntTSL 513.85□□□□□ -0.193e-10■■□□□ 12.7
PRPF8Q6P2Q9 GSE1-205ENST00000412692 6625 ntTSL 511.85□□□□□ -0.511e-7■■□□□ 12.7
PRPF8Q6P2Q9 BCAM-210ENST00000591520 878 ntTSL 316.97■□□□□ 0.311e-10■■□□□ 12.7
PRPF8Q6P2Q9 SDC1-204ENST00000429035 646 ntTSL 312.64□□□□□ -0.391e-7■■□□□ 12.7
PRPF8Q6P2Q9 SDC1-206ENST00000482879 558 ntTSL 410.16□□□□□ -0.781e-7■■□□□ 12.7
PRPF8Q6P2Q9 LAMA5-214ENST00000497363 579 ntTSL 314.14□□□□□ -0.156e-87■■□□□ 12.7
PRPF8Q6P2Q9 FGFR1-230ENST00000527114 1499 ntTSL 511.46□□□□□ -0.581e-6■■□□□ 12.7
PRPF8Q6P2Q9 METTL22-215ENST00000567295 714 ntTSL 313.62□□□□□ -0.232e-6■■□□□ 12.7
PRPF8Q6P2Q9 PRCC-202ENST00000454659 1084 ntTSL 312.12□□□□□ -0.472e-7■■□□□ 12.7
PRPF8Q6P2Q9 PRCC-207ENST00000526188 634 ntTSL 29.17□□□□□ -0.942e-7■■□□□ 12.7
PRPF8Q6P2Q9 TCIRG1-216ENST00000534673 848 ntTSL 317.45■□□□□ 0.387e-7■■□□□ 12.7
PRPF8Q6P2Q9 TCIRG1-202ENST00000524598 940 ntTSL 515.93■□□□□ 0.147e-7■■□□□ 12.7
PRPF8Q6P2Q9 CKB-207ENST00000554282 735 ntTSL 217.45■□□□□ 0.389e-8■■□□□ 12.7
PRPF8Q6P2Q9 C7orf26-204ENST00000445375 675 ntTSL 517.26■□□□□ 0.354e-12■■□□□ 12.7
PRPF8Q6P2Q9 C7orf26-206ENST00000477298 542 ntTSL 312.87□□□□□ -0.354e-12■■□□□ 12.7
PRPF8Q6P2Q9 C7orf26-203ENST00000440409 458 ntTSL 312.38□□□□□ -0.434e-12■■□□□ 12.7
PRPF8Q6P2Q9 SMAD2-211ENST00000589877 527 ntTSL 314.41□□□□□ -0.12e-6■■□□□ 12.7
PRPF8Q6P2Q9 NUP205-203ENST00000462316 571 ntTSL 44.51□□□□□ -1.693e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC12A7-204ENST00000513223 1066 ntTSL 512.94□□□□□ -0.342e-7■■□□□ 12.7
PRPF8Q6P2Q9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.85□□□□□ -0.192e-12■■□□□ 12.7
PRPF8Q6P2Q9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.462e-12■■□□□ 12.7
PRPF8Q6P2Q9 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC11.62□□□□□ -0.552e-12■■□□□ 12.7
PRPF8Q6P2Q9 SLC2A1-206ENST00000625233 1031 ntTSL 215.04■□□□□ -09e-16■■□□□ 12.7
PRPF8Q6P2Q9 SLC2A1-201ENST00000372500 533 ntTSL 313.77□□□□□ -0.219e-16■■□□□ 12.7
PRPF8Q6P2Q9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.311e-6■■□□□ 12.7
PRPF8Q6P2Q9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.34■□□□□ 0.051e-6■■□□□ 12.7
PRPF8Q6P2Q9 PLRG1-204ENST00000503751 873 ntTSL 27.67□□□□□ -1.182e-9■■□□□ 12.7
PRPF8Q6P2Q9 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC7.37□□□□□ -1.232e-9■■□□□ 12.7
PRPF8Q6P2Q9 PLRG1-210ENST00000509975 572 ntTSL 47.22□□□□□ -1.252e-9■■□□□ 12.7
PRPF8Q6P2Q9 PLRG1-206ENST00000506192 855 ntTSL 26.73□□□□□ -1.332e-9■■□□□ 12.7
PRPF8Q6P2Q9 PLRG1-211ENST00000512719 749 ntTSL 25.04□□□□□ -1.62e-9■■□□□ 12.7
PRPF8Q6P2Q9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.652e-9■■□□□ 12.7
PRPF8Q6P2Q9 PLRG1-213ENST00000515520 576 ntTSL 22.75□□□□□ -1.972e-9■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-203ENST00000466929 506 ntTSL 319.84■□□□□ 0.772e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-204ENST00000468781 660 ntTSL 219.84■□□□□ 0.772e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.662e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-208ENST00000495641 926 ntTSL 218.71■□□□□ 0.582e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-202ENST00000466409 2291 ntTSL 1 (best)17.45■□□□□ 0.382e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-207ENST00000490488 759 ntTSL 1 (best)10.85□□□□□ -0.672e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-209ENST00000498243 793 ntTSL 210.76□□□□□ -0.692e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-205ENST00000475574 306 ntTSL 59.9□□□□□ -0.822e-33■■□□□ 12.7
PRPF8Q6P2Q9 CARD19-206ENST00000488630 2690 ntTSL 29.72□□□□□ -0.852e-33■■□□□ 12.7
PRPF8Q6P2Q9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.039e-11■■□□□ 12.7
PRPF8Q6P2Q9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.23□□□□□ -0.299e-11■■□□□ 12.7
PRPF8Q6P2Q9 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC10.72□□□□□ -0.699e-11■■□□□ 12.7
PRPF8Q6P2Q9 FN3K-205ENST00000574496 594 ntTSL 316.82■□□□□ 0.282e-6■■□□□ 12.7
PRPF8Q6P2Q9 OGDH-208ENST00000459672 601 ntTSL 49.55□□□□□ -0.882e-6■■□□□ 12.7
PRPF8Q6P2Q9 OGDH-209ENST00000497326 554 ntTSL 48.21□□□□□ -1.092e-6■■□□□ 12.7
PRPF8Q6P2Q9 SUB1-208ENST00000511175 636 ntTSL 20.35□□□□□ -2.352e-6■■□□□ 12.7
PRPF8Q6P2Q9 PSMD7-202ENST00000563150 724 ntTSL 23.61□□□□□ -1.832e-13■■□□□ 12.7
PRPF8Q6P2Q9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.443e-6■■□□□ 12.7
PRPF8Q6P2Q9 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.493e-6■■□□□ 12.7
PRPF8Q6P2Q9 TOMM7-204ENST00000463284 731 ntTSL 211.29□□□□□ -0.63e-6■■□□□ 12.7
PRPF8Q6P2Q9 GTF2H4-206ENST00000487746 1126 ntTSL 59.91□□□□□ -0.824e-9■■□□□ 12.7
PRPF8Q6P2Q9 SRPRA-207ENST00000532268 829 ntTSL 27.77□□□□□ -1.173e-6■■□□□ 12.7
PRPF8Q6P2Q9 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.52□□□□□ -1.373e-6■■□□□ 12.7
PRPF8Q6P2Q9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.18□□□□□ -1.583e-6■■□□□ 12.7
PRPF8Q6P2Q9 TOMM7-206ENST00000496129 520 ntTSL 1 (best)4.8□□□□□ -1.643e-6■■□□□ 12.7
PRPF8Q6P2Q9 TOMM7-205ENST00000483581 551 ntTSL 1 (best)1.41□□□□□ -2.183e-6■■□□□ 12.7
PRPF8Q6P2Q9 GSDMD-202ENST00000524846 3462 ntTSL 211.96□□□□□ -0.51e-7■■□□□ 12.7
PRPF8Q6P2Q9 INF2-205ENST00000474229 947 ntTSL 316.3■□□□□ 0.21e-6■■□□□ 12.7
PRPF8Q6P2Q9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.17■■□□□ 1.142e-6■■□□□ 12.7
PRPF8Q6P2Q9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.582e-6■■□□□ 12.7
PRPF8Q6P2Q9 SLC9A3R2-205ENST00000564033 1087 ntTSL 216.07■□□□□ 0.162e-6■■□□□ 12.7
PRPF8Q6P2Q9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.85□□□□□ -0.032e-6■■□□□ 12.7
PRPF8Q6P2Q9 SLC9A3R2-207ENST00000565855 759 ntTSL 213.8□□□□□ -0.22e-6■■□□□ 12.7
PRPF8Q6P2Q9 SLC9A3R2-203ENST00000561844 738 ntTSL 312.1□□□□□ -0.472e-6■■□□□ 12.7
PRPF8Q6P2Q9 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC11.29□□□□□ -0.62e-6■■□□□ 12.7
PRPF8Q6P2Q9 ABLIM1-213ENST00000485570 498 ntTSL 511.25□□□□□ -0.611e-9■■□□□ 12.7
PRPF8Q6P2Q9 PSMF1-207ENST00000435720 319 ntTSL 57.86□□□□□ -1.153e-10■■□□□ 12.7
PRPF8Q6P2Q9 PSMF1-210ENST00000484891 4030 ntTSL 26.92□□□□□ -1.33e-10■■□□□ 12.7
PRPF8Q6P2Q9 AURKAIP1-205ENST00000489799 695 ntTSL 1 (best)20.37■□□□□ 0.852e-7■■□□□ 12.7
PRPF8Q6P2Q9 AURKAIP1-206ENST00000496905 608 ntTSL 216.09■□□□□ 0.172e-7■■□□□ 12.7
PRPF8Q6P2Q9 TTC7A-205ENST00000440051 641 ntTSL 512.64□□□□□ -0.391e-8■■□□□ 12.7
PRPF8Q6P2Q9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.942e-7■■□□□ 12.7
PRPF8Q6P2Q9 SHC2-205ENST00000590170 816 ntTSL 515.74■□□□□ 0.112e-7■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-211ENST00000529510 850 ntTSL 514.94□□□□□ -0.021e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-206ENST00000525372 1388 ntTSL 1 (best)14.93□□□□□ -0.021e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-215ENST00000534384 554 ntTSL 412.19□□□□□ -0.461e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-218ENST00000638186 2074 ntTSL 511.3□□□□□ -0.61e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-209ENST00000526626 730 ntTSL 511.28□□□□□ -0.61e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-203ENST00000524428 1526 ntTSL 1 (best)8.89□□□□□ -0.991e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-207ENST00000525787 1058 ntTSL 28.28□□□□□ -1.081e-8■■□□□ 12.7
PRPF8Q6P2Q9 SLC37A4-214ENST00000532888 1351 ntTSL 57.66□□□□□ -1.181e-8■■□□□ 12.7
PRPF8Q6P2Q9 BAIAP2-208ENST00000572073 782 ntTSL 314.19□□□□□ -0.144e-7■■□□□ 12.7
PRPF8Q6P2Q9 EPS8L2-206ENST00000526380 545 ntTSL 313.51□□□□□ -0.252e-19■■□□□ 12.7
PRPF8Q6P2Q9 DAGLB-205ENST00000454738 1374 ntTSL 218.42■□□□□ 0.542e-6■■□□□ 12.7
PRPF8Q6P2Q9 LMO7-224ENST00000533305 720 ntTSL 56.04□□□□□ -1.442e-6■■□□□ 12.7
Retrieved 100 of 73,762 protein–RNA pairs in 538.6 ms