Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
UBE4BO95155 OR2T4-202ENST00000366475 1047 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AL450124.1-201ENST00000376401 353 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 MIR30C1-201ENST00000385227 89 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.75□□□□□ -1.01
UBE4BO95155 METTL8P1-201ENST00000428182 611 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AC097358.1-201ENST00000438827 582 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC013439.1-201ENST00000449965 1239 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 AL355076.1-201ENST00000484315 270 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AC107385.1-201ENST00000507985 778 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 SNORA70.23-201ENST00000517218 151 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC8.75□□□□□ -1.01
UBE4BO95155 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 DNM1P33-201ENST00000565222 270 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.75□□□□□ -1.01
UBE4BO95155 MIR4682-201ENST00000580643 80 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC114810.1-201ENST00000607415 473 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 AC074029.3-201ENST00000618623 312 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 XRCC6P2-201ENST00000457831 1822 ntBASIC8.75□□□□□ -1.01
UBE4BO95155 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
UBE4BO95155 AP000705.2-201ENST00000433524 1386 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 AC036108.4-201ENST00000611654 2516 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 AKR1E2-203ENST00000345253 913 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 RNU4-59P-201ENST00000364447 116 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
UBE4BO95155 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC8.74□□□□□ -1.01
UBE4BO95155 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC8.74□□□□□ -1.01
UBE4BO95155 RBM22P5-201ENST00000449536 1277 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC8.74□□□□□ -1.01
UBE4BO95155 SNX18P8-201ENST00000455120 874 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 POLB-211ENST00000521492 786 ntTSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 SDHCP4-201ENST00000532834 510 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.74□□□□□ -1.01
UBE4BO95155 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC8.74□□□□□ -1.01
UBE4BO95155 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC8.74□□□□□ -1.01
UBE4BO95155 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.74□□□□□ -1.01
UBE4BO95155 AL109933.4-201ENST00000612111 157 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 ELMO2P1-202ENST00000614283 794 ntBASIC8.74□□□□□ -1.01
UBE4BO95155 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
UBE4BO95155 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
UBE4BO95155 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.74□□□□□ -1.01
UBE4BO95155 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 TDGF1P3-202ENST00000602699 2710 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
UBE4BO95155 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
UBE4BO95155 LINC00663-203ENST00000586885 2546 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 NBPF25P-201ENST00000606775 2019 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms