Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
RFPL1O75677 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.21□□□□□ -1.1
RFPL1O75677 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.21□□□□□ -1.1
RFPL1O75677 MAPK10-319ENST00000641459 2542 ntBASIC8.21□□□□□ -1.1
RFPL1O75677 MITF-202ENST00000314589 1993 ntTSL 2 BASIC8.21□□□□□ -1.1
RFPL1O75677 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 SPATA7-201ENST00000045347 1410 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 AL031123.2-201ENST00000563225 3325 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RFPL1O75677 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RFPL1O75677 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 CLEC12B-201ENST00000338896 1097 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 RNA5SP145-201ENST00000363124 125 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RFPL1O75677 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RFPL1O75677 AC244453.4-201ENST00000419150 388 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RFPL1O75677 TRGV7-201ENST00000427089 353 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 AL441963.1-201ENST00000435137 792 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 DNAJA1P6-201ENST00000437347 354 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 AL353754.1-201ENST00000440219 340 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 AL035417.1-201ENST00000442754 214 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RFPL1O75677 GAPDHP44-201ENST00000513513 1007 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 AC090835.1-201ENST00000515189 1024 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 SNRPCP14-201ENST00000524498 205 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 AC025252.2-201ENST00000537470 502 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 AC078878.1-201ENST00000539832 958 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC8.2□□□□□ -1.1
RFPL1O75677 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.2□□□□□ -1.1
RFPL1O75677 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.2□□□□□ -1.1
RFPL1O75677 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
RFPL1O75677 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.2□□□□□ -1.1
RFPL1O75677 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.2□□□□□ -1.1
RFPL1O75677 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.2□□□□□ -1.1
RFPL1O75677 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 AC073534.1-201ENST00000598671 1056 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 MIR6751-201ENST00000610479 63 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 FAM74A6-203ENST00000615956 481 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC8.2□□□□□ -1.1
RFPL1O75677 MIR6807-201ENST00000621968 92 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC8.2□□□□□ -1.1
RFPL1O75677 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 Z82209.2-201ENST00000623410 2012 ntBASIC8.2□□□□□ -1.1
RFPL1O75677 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.2□□□□□ -1.1
RFPL1O75677 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC8.2□□□□□ -1.1
RFPL1O75677 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFPL1O75677 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.19□□□□□ -1.1
RFPL1O75677 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RFPL1O75677 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.19□□□□□ -1.1
RFPL1O75677 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RFPL1O75677 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.19□□□□□ -1.1
RFPL1O75677 TNFSF15-201ENST00000374044 2789 ntBASIC8.19□□□□□ -1.1
RFPL1O75677 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RFPL1O75677 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFPL1O75677 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.19□□□□□ -1.1
RFPL1O75677 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.19□□□□□ -1.1
RFPL1O75677 MITD1-201ENST00000289359 939 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms