Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 AC104447.1-201ENST00000624214 2124 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 SPATA7-201ENST00000045347 1410 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 AL049869.1-201ENST00000556933 1402 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 MIR135B-201ENST00000362189 97 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 RPL3P4-201ENST00000417615 423 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 RPSAP59-201ENST00000421048 890 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 AC008155.1-201ENST00000421078 329 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 OR3B1P-201ENST00000437536 893 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 AC245047.6-201ENST00000445444 617 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 AC004801.2-201ENST00000468202 779 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 KRT18P54-201ENST00000513396 748 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 PIGFP1-201ENST00000519180 653 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 MIR3689F-201ENST00000579617 66 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 RN7SL311P-201ENST00000579858 306 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 MIR8075-201ENST00000614354 80 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 RN7SL301P-202ENST00000618767 298 ntBASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 FTO-222ENST00000637969 2889 ntTSL 5 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC7.39□□□□□ -1.23
NPIPA3F8WFD2 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC004491.1-201ENST00000623029 1882 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 RNA5SP301-201ENST00000362537 121 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 CLCN3P1-201ENST00000423965 1017 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC100843.1-201ENST00000475372 550 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AL355076.1-201ENST00000484315 270 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 NMNAT1P4-201ENST00000505598 840 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC087280.1-201ENST00000530632 1003 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 AC087885.1-201ENST00000641910 848 ntBASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC7.38□□□□□ -1.23
NPIPA3F8WFD2 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms