Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 AC010323.2-201ENST00000596405 594 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 AC008626.1-201ENST00000604384 255 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 AC113554.1-201ENST00000606284 490 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 RN7SL715P-201ENST00000606972 286 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 RN7SL82P-201ENST00000611435 237 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 AC245028.3-201ENST00000618197 285 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 RN7SL628P-201ENST00000619139 237 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 MAPK10-319ENST00000641459 2542 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 AL365475.1-201ENST00000565135 1949 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 RBMY1D-203ENST00000418956 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
FOXG1P55316 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 OR8G3P-203ENST00000641848 1344 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
FOXG1P55316 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 OR56A1-201ENST00000316650 1071 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 OR2L1P-201ENST00000422727 938 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 RPL23AP34-201ENST00000423483 410 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXG1P55316 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.04□□□□□ -1.28
FOXG1P55316 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXG1P55316 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXG1P55316 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXG1P55316 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXG1P55316 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXG1P55316 AC116353.1-201ENST00000489727 316 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXG1P55316 NMNAT1P4-201ENST00000505598 840 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXG1P55316 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC7.04□□□□□ -1.28
FOXG1P55316 AC068134.3-201ENST00000513620 788 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 AC084251.1-201ENST00000521867 382 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXG1P55316 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.04□□□□□ -1.28
FOXG1P55316 AL158151.4-201ENST00000600965 507 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXG1P55316 AL451054.3-201ENST00000611115 776 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 BNIP3P41-202ENST00000616656 861 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 AC006213.5-201ENST00000619673 288 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 AC090373.1-201ENST00000623955 603 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
FOXG1P55316 KDELC1P1-201ENST00000512118 1509 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXG1P55316 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 TRIM60P19-201ENST00000452879 1462 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 MFSD8-243ENST00000641695 1455 ntBASIC7.04□□□□□ -1.28
FOXG1P55316 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
FOXG1P55316 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXG1P55316 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXG1P55316 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
FOXG1P55316 FTO-222ENST00000637969 2889 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXG1P55316 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms