Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 AC020907.5-201ENST00000624372 1936 ntBASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 TSPY20P-201ENST00000450910 630 ntBASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 AC105036.2-201ENST00000569468 176 ntBASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX49Q9Y6V7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 AL034346.1-201ENST00000568244 1277 ntBASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 MIR4651-201ENST00000582622 73 ntBASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 AC053503.5-201ENST00000601508 636 ntBASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX49Q9Y6V7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
DDX49Q9Y6V7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 CD99P1-205ENST00000527459 561 ntBASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX49Q9Y6V7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX49Q9Y6V7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 AC068338.2-201ENST00000563278 1430 ntBASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 TERF1P5-201ENST00000477545 1207 ntBASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 AF201337.1-201ENST00000520239 748 ntBASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms