Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.99■■□□□ 1.43
CYP46A1Q9Y6A2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 RARRES2P4-201ENST00000514074 484 ntBASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.98■■□□□ 1.43
CYP46A1Q9Y6A2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 BID-214ENST00000617586 542 ntTSL 5 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.97■■□□□ 1.43
CYP46A1Q9Y6A2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CYP46A1Q9Y6A2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CYP46A1Q9Y6A2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CYP46A1Q9Y6A2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 AC100791.3-201ENST00000617619 330 ntBASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CYP46A1Q9Y6A2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 MCRIP2P1-201ENST00000394346 511 ntBASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.94■■□□□ 1.42
CYP46A1Q9Y6A2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CYP46A1Q9Y6A2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.93■■□□□ 1.42
CYP46A1Q9Y6A2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CYP46A1Q9Y6A2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms