Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 MIR663A-201ENST00000385250 93 ntBASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 GPX1P1-201ENST00000388829 606 ntBASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 AC053503.5-201ENST00000601508 636 ntBASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSM4Q9Y4Z0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 AC061975.6-201ENST00000579045 1553 ntBASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSM4Q9Y4Z0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSM4Q9Y4Z0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM4Q9Y4Z0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSM4Q9Y4Z0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms